Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 IRC15YPL017C 1500 nt10.02□□□□□ -0.8
SHH3Q04487 SCC4YER147C 1875 nt10.02□□□□□ -0.81
SHH3Q04487 GUT2YIL155C 1950 nt9.97□□□□□ -0.81
SHH3Q04487 PCH2YBR186W 1695 nt9.97□□□□□ -0.81
SHH3Q04487 SHU1YHL006C 453 nt9.96□□□□□ -0.82
SHH3Q04487 HOM6YJR139C 1080 nt9.96□□□□□ -0.82
SHH3Q04487 GIS3YLR094C 1509 nt9.96□□□□□ -0.82
SHH3Q04487 GFD2YCL036W 1701 nt9.95□□□□□ -0.82
SHH3Q04487 ART5YGR068C 1761 nt9.94□□□□□ -0.82
SHH3Q04487 SEC11YIR022W 504 nt9.94□□□□□ -0.82
SHH3Q04487 PET9YBL030C 957 nt9.9□□□□□ -0.82
SHH3Q04487 YAL037C-BYAL037C-B 975 nt9.89□□□□□ -0.83
SHH3Q04487 YCH1YGR203W 447 nt9.86□□□□□ -0.83
SHH3Q04487 RTS2YOR077W 699 nt9.85□□□□□ -0.83
SHH3Q04487 MNP1YGL068W 585 nt9.83□□□□□ -0.84
SHH3Q04487 PIB2YGL023C 1908 nt9.82□□□□□ -0.84
SHH3Q04487 RKM5YLR137W 1104 nt9.82□□□□□ -0.84
SHH3Q04487 YSC84YHR016C 1407 nt9.81□□□□□ -0.84
SHH3Q04487 CUE1YMR264W 612 nt9.8□□□□□ -0.84
SHH3Q04487 TIR4YOR009W 1464 nt9.79□□□□□ -0.84
SHH3Q04487 BOR1YNL275W 1731 nt9.77□□□□□ -0.85
SHH3Q04487 YHL050CYHL050C 2094 nt9.75□□□□□ -0.85
SHH3Q04487 YMR057CYMR057C 372 nt9.72□□□□□ -0.85
SHH3Q04487 YKL097CYKL097C 411 nt9.7□□□□□ -0.86
SHH3Q04487 RRT12YCR045C 1476 nt9.69□□□□□ -0.86
SHH3Q04487 MCH5YOR306C 1566 nt9.68□□□□□ -0.86
SHH3Q04487 YIL100WYIL100W 354 nt9.68□□□□□ -0.86
SHH3Q04487 YNL195CYNL195C 786 nt9.68□□□□□ -0.86
SHH3Q04487 NPL3YDR432W 1245 nt9.67□□□□□ -0.86
SHH3Q04487 YJL225CYJL225C 5277 nt9.65□□□□□ -0.86
SHH3Q04487 RTF1YGL244W 1677 nt9.65□□□□□ -0.86
SHH3Q04487 YLR236CYLR236C 324 nt9.62□□□□□ -0.87
SHH3Q04487 YLR154C-GYLR154C-G 150 nt9.61□□□□□ -0.87
SHH3Q04487 BOP3YNL042W 1191 nt9.6□□□□□ -0.87
SHH3Q04487 YJL152WYJL152W 360 nt9.58□□□□□ -0.88
SHH3Q04487 YOL037CYOL037C 354 nt9.57□□□□□ -0.88
SHH3Q04487 YCL048W-AYCL048W-A 240 nt9.55□□□□□ -0.88
SHH3Q04487 PTK1YKL198C 1989 nt9.51□□□□□ -0.89
SHH3Q04487 NCP1YHR042W 2076 nt9.47□□□□□ -0.89
SHH3Q04487 ALG12YNR030W 1656 nt9.44□□□□□ -0.9
SHH3Q04487 WHI5YOR083W 888 nt9.38□□□□□ -0.91
SHH3Q04487 YLR281CYLR281C 468 nt9.37□□□□□ -0.91
SHH3Q04487 YOR139CYOR139C 393 nt9.36□□□□□ -0.91
SHH3Q04487 LCB1YMR296C 1677 nt9.35□□□□□ -0.91
SHH3Q04487 RRD1YIL153W 1182 nt9.33□□□□□ -0.92
SHH3Q04487 RDN37-1RDN37-1 5354 nt9.32□□□□□ -0.92
SHH3Q04487 RDN37-2RDN37-2 5354 nt9.32□□□□□ -0.92
SHH3Q04487 FMP52YER004W 696 nt9.32□□□□□ -0.92
SHH3Q04487 IDH1YNL037C 1083 nt9.32□□□□□ -0.92
SHH3Q04487 YFL054CYFL054C 1941 nt9.31□□□□□ -0.92
SHH3Q04487 GBP2YCL011C 1284 nt9.29□□□□□ -0.92
SHH3Q04487 HSP60YLR259C 1719 nt9.28□□□□□ -0.92
SHH3Q04487 SPT8YLR055C 1809 nt9.26□□□□□ -0.93
SHH3Q04487 DED1YOR204W 1815 nt9.25□□□□□ -0.93
SHH3Q04487 TCD2YKL027W 1344 nt9.25□□□□□ -0.93
SHH3Q04487 PCM1YEL058W 1674 nt9.23□□□□□ -0.93
SHH3Q04487 IMP2'YIL154C 1041 nt9.22□□□□□ -0.93
SHH3Q04487 SIM1YIL123W 1431 nt9.22□□□□□ -0.93
SHH3Q04487 FMT1YBL013W 1206 nt9.19□□□□□ -0.94
SHH3Q04487 LYS4YDR234W 2082 nt9.17□□□□□ -0.94
SHH3Q04487 DSK2YMR276W 1122 nt9.15□□□□□ -0.94
SHH3Q04487 ADH2YMR303C 1047 nt9.14□□□□□ -0.95
SHH3Q04487 BIO4YNR057C 714 nt9.14□□□□□ -0.95
SHH3Q04487 NAR1YNL240C 1476 nt9.14□□□□□ -0.95
SHH3Q04487 PUS2YGL063W 1113 nt9.13□□□□□ -0.95
SHH3Q04487 SNF6YHL025W 999 nt9.13□□□□□ -0.95
SHH3Q04487 CWP1YKL096W 720 nt9.13□□□□□ -0.95
SHH3Q04487 SOR2YDL246C 1074 nt9.1□□□□□ -0.95
SHH3Q04487 YDR433WYDR433W 441 nt9.1□□□□□ -0.95
SHH3Q04487 SOR1YJR159W 1074 nt9.1□□□□□ -0.95
SHH3Q04487 SWE1YJL187C 2460 nt9.1□□□□□ -0.95
SHH3Q04487 FMP45YDL222C 930 nt9.07□□□□□ -0.96
SHH3Q04487 ERF2YLR246W 1080 nt9.06□□□□□ -0.96
SHH3Q04487 MXR2YCL033C 507 nt9.06□□□□□ -0.96
SHH3Q04487 tM(CAU)CtM(CAU)C 72 nt9.05□□□□□ -0.96
SHH3Q04487 IMT4tM(CAU)E 72 nt9.05□□□□□ -0.96
SHH3Q04487 IMT3tM(CAU)J3 72 nt9.05□□□□□ -0.96
SHH3Q04487 IMT1tM(CAU)O1 72 nt9.05□□□□□ -0.96
SHH3Q04487 IMT2tM(CAU)P 72 nt9.05□□□□□ -0.96
SHH3Q04487 YPR011CYPR011C 981 nt9.05□□□□□ -0.96
SHH3Q04487 GLK1YCL040W 1503 nt9.05□□□□□ -0.96
SHH3Q04487 HSL7YBR133C 2484 nt9.05□□□□□ -0.96
SHH3Q04487 YIH1YCR059C 777 nt9.04□□□□□ -0.96
SHH3Q04487 YCL042WYCL042W 360 nt9.04□□□□□ -0.96
SHH3Q04487 CRR1YLR213C 1269 nt9.03□□□□□ -0.96
SHH3Q04487 ERV46YAL042W 1248 nt9.02□□□□□ -0.97
SHH3Q04487 YKR040CYKR040C 504 nt8.99□□□□□ -0.97
SHH3Q04487 RNQ1YCL028W 1218 nt8.99□□□□□ -0.97
SHH3Q04487 YLL053CYLL053C 459 nt8.98□□□□□ -0.97
SHH3Q04487 LPX1YOR084W 1164 nt8.97□□□□□ -0.97
SHH3Q04487 FRD1YEL047C 1413 nt8.97□□□□□ -0.97
SHH3Q04487 YHR056W-AYHR056W-A 435 nt8.96□□□□□ -0.98
SHH3Q04487 CMP2YML057W 1815 nt8.96□□□□□ -0.98
SHH3Q04487 ATF2YGR177C 1608 nt8.92□□□□□ -0.98
SHH3Q04487 HEM12YDR047W 1089 nt8.92□□□□□ -0.98
SHH3Q04487 YFL067WYFL067W 528 nt8.91□□□□□ -0.98
SHH3Q04487 FTR1YER145C 1215 nt8.89□□□□□ -0.99
SHH3Q04487 MIC10YCL057C-A 294 nt8.89□□□□□ -0.99
SHH3Q04487 RDN25-1RDN25-1 3396 nt8.89□□□□□ -0.99
SHH3Q04487 RDN25-2RDN25-2 3396 nt8.89□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 9.6 ms