Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 GIS3YLR094C 1509 nt13.36□□□□□ -0.27
VPS60Q03390 PST2YDR032C 597 nt13.33□□□□□ -0.28
VPS60Q03390 GFD2YCL036W 1701 nt13.27□□□□□ -0.29
VPS60Q03390 ART5YGR068C 1761 nt13.27□□□□□ -0.29
VPS60Q03390 PIB2YGL023C 1908 nt13.22□□□□□ -0.29
VPS60Q03390 YSC84YHR016C 1407 nt13.22□□□□□ -0.29
VPS60Q03390 YFL021C-AYFL021C-A 855 nt13.19□□□□□ -0.3
VPS60Q03390 PET9YBL030C 957 nt13.18□□□□□ -0.3
VPS60Q03390 RTS2YOR077W 699 nt13.18□□□□□ -0.3
VPS60Q03390 YGR021WYGR021W 873 nt13.14□□□□□ -0.31
VPS60Q03390 YHL050CYHL050C 2094 nt13.12□□□□□ -0.31
VPS60Q03390 CUE1YMR264W 612 nt13.09□□□□□ -0.31
VPS60Q03390 YCH1YGR203W 447 nt13.08□□□□□ -0.32
VPS60Q03390 RTF1YGL244W 1677 nt13.08□□□□□ -0.32
VPS60Q03390 RRT12YCR045C 1476 nt13.04□□□□□ -0.32
VPS60Q03390 HOM6YJR139C 1080 nt13.04□□□□□ -0.32
VPS60Q03390 YNL195CYNL195C 786 nt13□□□□□ -0.33
VPS60Q03390 TIR4YOR009W 1464 nt12.99□□□□□ -0.33
VPS60Q03390 BOP3YNL042W 1191 nt12.96□□□□□ -0.33
VPS60Q03390 YIL100WYIL100W 354 nt12.94□□□□□ -0.34
VPS60Q03390 SHU1YHL006C 453 nt12.93□□□□□ -0.34
VPS60Q03390 YMR057CYMR057C 372 nt12.93□□□□□ -0.34
VPS60Q03390 YAL037C-BYAL037C-B 975 nt12.92□□□□□ -0.34
VPS60Q03390 PTK1YKL198C 1989 nt12.89□□□□□ -0.35
VPS60Q03390 MNP1YGL068W 585 nt12.86□□□□□ -0.35
VPS60Q03390 FPS1YLL043W 2010 nt12.86□□□□□ -0.35
VPS60Q03390 RKM5YLR137W 1104 nt12.85□□□□□ -0.35
VPS60Q03390 YLR236CYLR236C 324 nt12.83□□□□□ -0.36
VPS60Q03390 YJL225CYJL225C 5277 nt12.8□□□□□ -0.36
VPS60Q03390 BOR1YNL275W 1731 nt12.76□□□□□ -0.37
VPS60Q03390 NCP1YHR042W 2076 nt12.73□□□□□ -0.37
VPS60Q03390 NPL3YDR432W 1245 nt12.72□□□□□ -0.37
VPS60Q03390 UME6YDR207C 2511 nt12.69□□□□□ -0.38
VPS60Q03390 YJL152WYJL152W 360 nt12.67□□□□□ -0.38
VPS60Q03390 YCL048W-AYCL048W-A 240 nt12.66□□□□□ -0.38
VPS60Q03390 YLR154C-GYLR154C-G 150 nt12.63□□□□□ -0.39
VPS60Q03390 YFL054CYFL054C 1941 nt12.61□□□□□ -0.39
VPS60Q03390 SPT8YLR055C 1809 nt12.55□□□□□ -0.4
VPS60Q03390 LCB1YMR296C 1677 nt12.52□□□□□ -0.4
VPS60Q03390 YKL097CYKL097C 411 nt12.47□□□□□ -0.41
VPS60Q03390 YOL037CYOL037C 354 nt12.43□□□□□ -0.42
VPS60Q03390 MCH5YOR306C 1566 nt12.35□□□□□ -0.43
VPS60Q03390 HSP60YLR259C 1719 nt12.35□□□□□ -0.43
VPS60Q03390 RRD1YIL153W 1182 nt12.34□□□□□ -0.43
VPS60Q03390 FMP52YER004W 696 nt12.32□□□□□ -0.44
VPS60Q03390 SIM1YIL123W 1431 nt12.31□□□□□ -0.44
VPS60Q03390 ALG12YNR030W 1656 nt12.29□□□□□ -0.44
VPS60Q03390 SWE1YJL187C 2460 nt12.28□□□□□ -0.44
VPS60Q03390 PCM1YEL058W 1674 nt12.28□□□□□ -0.44
VPS60Q03390 LYS4YDR234W 2082 nt12.27□□□□□ -0.45
VPS60Q03390 IDH1YNL037C 1083 nt12.25□□□□□ -0.45
VPS60Q03390 WHI5YOR083W 888 nt12.25□□□□□ -0.45
VPS60Q03390 GBP2YCL011C 1284 nt12.24□□□□□ -0.45
VPS60Q03390 RDN37-1RDN37-1 5354 nt12.23□□□□□ -0.45
VPS60Q03390 RDN37-2RDN37-2 5354 nt12.23□□□□□ -0.45
VPS60Q03390 DED1YOR204W 1815 nt12.21□□□□□ -0.46
VPS60Q03390 TCD2YKL027W 1344 nt12.2□□□□□ -0.46
VPS60Q03390 YLR281CYLR281C 468 nt12.18□□□□□ -0.46
VPS60Q03390 BIO4YNR057C 714 nt12.16□□□□□ -0.46
VPS60Q03390 GLK1YCL040W 1503 nt12.16□□□□□ -0.46
VPS60Q03390 FMT1YBL013W 1206 nt12.15□□□□□ -0.46
VPS60Q03390 SNF6YHL025W 999 nt12.13□□□□□ -0.47
VPS60Q03390 ADH2YMR303C 1047 nt12.12□□□□□ -0.47
VPS60Q03390 CWP1YKL096W 720 nt12.11□□□□□ -0.47
VPS60Q03390 YOR139CYOR139C 393 nt12.07□□□□□ -0.48
VPS60Q03390 ERF2YLR246W 1080 nt12.05□□□□□ -0.48
VPS60Q03390 IMP2'YIL154C 1041 nt12.01□□□□□ -0.49
VPS60Q03390 CRR1YLR213C 1269 nt12.01□□□□□ -0.49
VPS60Q03390 FUR4YBR021W 1902 nt11.98□□□□□ -0.49
VPS60Q03390 YHR056W-AYHR056W-A 435 nt11.97□□□□□ -0.49
VPS60Q03390 SOR2YDL246C 1074 nt11.96□□□□□ -0.49
VPS60Q03390 SOR1YJR159W 1074 nt11.96□□□□□ -0.49
VPS60Q03390 YIH1YCR059C 777 nt11.95□□□□□ -0.5
VPS60Q03390 YDR433WYDR433W 441 nt11.95□□□□□ -0.5
VPS60Q03390 DSK2YMR276W 1122 nt11.94□□□□□ -0.5
VPS60Q03390 YCL042WYCL042W 360 nt11.94□□□□□ -0.5
VPS60Q03390 NAR1YNL240C 1476 nt11.94□□□□□ -0.5
VPS60Q03390 HEM12YDR047W 1089 nt11.91□□□□□ -0.5
VPS60Q03390 YLL053CYLL053C 459 nt11.91□□□□□ -0.5
VPS60Q03390 MXR2YCL033C 507 nt11.91□□□□□ -0.5
VPS60Q03390 RNQ1YCL028W 1218 nt11.89□□□□□ -0.51
VPS60Q03390 RAX1YOR301W 1308 nt11.88□□□□□ -0.51
VPS60Q03390 AAC1YMR056C 930 nt11.88□□□□□ -0.51
VPS60Q03390 MIC10YCL057C-A 294 nt11.88□□□□□ -0.51
VPS60Q03390 PRP4YPR178W 1398 nt11.88□□□□□ -0.51
VPS60Q03390 CCA1YER168C 1641 nt11.87□□□□□ -0.51
VPS60Q03390 FMP45YDL222C 930 nt11.87□□□□□ -0.51
VPS60Q03390 ATF2YGR177C 1608 nt11.86□□□□□ -0.51
VPS60Q03390 PUS2YGL063W 1113 nt11.86□□□□□ -0.51
VPS60Q03390 YFL067WYFL067W 528 nt11.84□□□□□ -0.51
VPS60Q03390 SNG1YGR197C 1644 nt11.83□□□□□ -0.52
VPS60Q03390 YEL076C-AYEL076C-A 651 nt11.83□□□□□ -0.52
VPS60Q03390 YEL076CYEL076C 651 nt11.83□□□□□ -0.52
VPS60Q03390 YLR464WYLR464W 651 nt11.83□□□□□ -0.52
VPS60Q03390 DPS1YLL018C 1674 nt11.81□□□□□ -0.52
VPS60Q03390 FTR1YER145C 1215 nt11.78□□□□□ -0.52
VPS60Q03390 FRD1YEL047C 1413 nt11.77□□□□□ -0.52
VPS60Q03390 YPR011CYPR011C 981 nt11.77□□□□□ -0.53
VPS60Q03390 ERV46YAL042W 1248 nt11.76□□□□□ -0.53
VPS60Q03390 YKR040CYKR040C 504 nt11.76□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms