Protein–RNA interactions for Protein: P53863

JJJ1, J protein JJJ1, yeastyeast

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
JJJ1P53863 YDL221WYDL221W 552 nt13.09□□□□□ -0.31
JJJ1P53863 YOL037CYOL037C 354 nt13.06□□□□□ -0.32
JJJ1P53863 FPS1YLL043W 2010 nt13.04□□□□□ -0.32
JJJ1P53863 YBR220CYBR220C 1683 nt13.02□□□□□ -0.33
JJJ1P53863 YOR139CYOR139C 393 nt12.99□□□□□ -0.33
JJJ1P53863 ART5YGR068C 1761 nt12.99□□□□□ -0.33
JJJ1P53863 SDH1YKL148C 1923 nt12.97□□□□□ -0.33
JJJ1P53863 GFD2YCL036W 1701 nt12.96□□□□□ -0.33
JJJ1P53863 NPL3YDR432W 1245 nt12.96□□□□□ -0.33
JJJ1P53863 PET9YBL030C 957 nt12.96□□□□□ -0.33
JJJ1P53863 YCH1YGR203W 447 nt12.95□□□□□ -0.34
JJJ1P53863 IRC15YPL017C 1500 nt12.94□□□□□ -0.34
JJJ1P53863 TAT1YBR069C 1860 nt12.91□□□□□ -0.34
JJJ1P53863 TIR4YOR009W 1464 nt12.9□□□□□ -0.34
JJJ1P53863 SCC4YER147C 1875 nt12.86□□□□□ -0.35
JJJ1P53863 YLR154C-GYLR154C-G 150 nt12.85□□□□□ -0.35
JJJ1P53863 GIS3YLR094C 1509 nt12.84□□□□□ -0.35
JJJ1P53863 RTS2YOR077W 699 nt12.79□□□□□ -0.36
JJJ1P53863 YMR057CYMR057C 372 nt12.77□□□□□ -0.37
JJJ1P53863 YJL152WYJL152W 360 nt12.76□□□□□ -0.37
JJJ1P53863 CUE1YMR264W 612 nt12.75□□□□□ -0.37
JJJ1P53863 YLR281CYLR281C 468 nt12.74□□□□□ -0.37
JJJ1P53863 WHI5YOR083W 888 nt12.74□□□□□ -0.37
JJJ1P53863 Q0182Q0182 405 nt12.63□□□□□ -0.39
JJJ1P53863 SEC11YIR022W 504 nt12.63□□□□□ -0.39
JJJ1P53863 YJL225CYJL225C 5277 nt12.62□□□□□ -0.39
JJJ1P53863 YCL048W-AYCL048W-A 240 nt12.61□□□□□ -0.39
JJJ1P53863 YLR236CYLR236C 324 nt12.6□□□□□ -0.39
JJJ1P53863 YIL100WYIL100W 354 nt12.59□□□□□ -0.39
JJJ1P53863 YSC84YHR016C 1407 nt12.54□□□□□ -0.4
JJJ1P53863 PCH2YBR186W 1695 nt12.54□□□□□ -0.4
JJJ1P53863 PUS2YGL063W 1113 nt12.53□□□□□ -0.4
JJJ1P53863 tM(CAU)CtM(CAU)C 72 nt12.53□□□□□ -0.4
JJJ1P53863 IMT4tM(CAU)E 72 nt12.53□□□□□ -0.4
JJJ1P53863 IMT3tM(CAU)J3 72 nt12.53□□□□□ -0.4
JJJ1P53863 IMT1tM(CAU)O1 72 nt12.53□□□□□ -0.4
JJJ1P53863 IMT2tM(CAU)P 72 nt12.53□□□□□ -0.4
JJJ1P53863 IMP2'YIL154C 1041 nt12.53□□□□□ -0.4
JJJ1P53863 YNL195CYNL195C 786 nt12.51□□□□□ -0.41
JJJ1P53863 IDH1YNL037C 1083 nt12.5□□□□□ -0.41
JJJ1P53863 YHL050CYHL050C 2094 nt12.48□□□□□ -0.41
JJJ1P53863 GUT2YIL155C 1950 nt12.47□□□□□ -0.41
JJJ1P53863 RRT12YCR045C 1476 nt12.46□□□□□ -0.42
JJJ1P53863 DSK2YMR276W 1122 nt12.45□□□□□ -0.42
JJJ1P53863 GBP2YCL011C 1284 nt12.42□□□□□ -0.42
JJJ1P53863 RDN37-1RDN37-1 5354 nt12.42□□□□□ -0.42
JJJ1P53863 RDN37-2RDN37-2 5354 nt12.42□□□□□ -0.42
JJJ1P53863 RRD1YIL153W 1182 nt12.35□□□□□ -0.43
JJJ1P53863 YPR011CYPR011C 981 nt12.33□□□□□ -0.44
JJJ1P53863 TCD2YKL027W 1344 nt12.33□□□□□ -0.44
JJJ1P53863 FMP52YER004W 696 nt12.29□□□□□ -0.44
JJJ1P53863 DED1YOR204W 1815 nt12.28□□□□□ -0.44
JJJ1P53863 FMP45YDL222C 930 nt12.26□□□□□ -0.45
JJJ1P53863 YDR433WYDR433W 441 nt12.26□□□□□ -0.45
JJJ1P53863 PIB2YGL023C 1908 nt12.26□□□□□ -0.45
JJJ1P53863 RTF1YGL244W 1677 nt12.25□□□□□ -0.45
JJJ1P53863 ERV46YAL042W 1248 nt12.24□□□□□ -0.45
JJJ1P53863 BOP3YNL042W 1191 nt12.23□□□□□ -0.45
JJJ1P53863 FMT1YBL013W 1206 nt12.19□□□□□ -0.46
JJJ1P53863 MXR2YCL033C 507 nt12.18□□□□□ -0.46
JJJ1P53863 YKR040CYKR040C 504 nt12.17□□□□□ -0.46
JJJ1P53863 LPX1YOR084W 1164 nt12.17□□□□□ -0.46
JJJ1P53863 UME6YDR207C 2511 nt12.17□□□□□ -0.46
JJJ1P53863 NCP1YHR042W 2076 nt12.14□□□□□ -0.47
JJJ1P53863 PCM1YEL058W 1674 nt12.13□□□□□ -0.47
JJJ1P53863 SOR2YDL246C 1074 nt12.11□□□□□ -0.47
JJJ1P53863 SOR1YJR159W 1074 nt12.11□□□□□ -0.47
JJJ1P53863 CWP1YKL096W 720 nt12.09□□□□□ -0.47
JJJ1P53863 LCB1YMR296C 1677 nt12.08□□□□□ -0.48
JJJ1P53863 ADH2YMR303C 1047 nt12.08□□□□□ -0.48
JJJ1P53863 YCL042WYCL042W 360 nt12.08□□□□□ -0.48
JJJ1P53863 PTK1YKL198C 1989 nt12.05□□□□□ -0.48
JJJ1P53863 SNF6YHL025W 999 nt12.04□□□□□ -0.48
JJJ1P53863 FRD1YEL047C 1413 nt12.03□□□□□ -0.48
JJJ1P53863 SIM1YIL123W 1431 nt12.02□□□□□ -0.49
JJJ1P53863 BIO4YNR057C 714 nt11.95□□□□□ -0.5
JJJ1P53863 MOT3YMR070W 1473 nt11.94□□□□□ -0.5
JJJ1P53863 YIH1YCR059C 777 nt11.93□□□□□ -0.5
JJJ1P53863 RNQ1YCL028W 1218 nt11.89□□□□□ -0.51
JJJ1P53863 LYS4YDR234W 2082 nt11.83□□□□□ -0.51
JJJ1P53863 ERF2YLR246W 1080 nt11.83□□□□□ -0.52
JJJ1P53863 SPP1YPL138C 1062 nt11.83□□□□□ -0.52
JJJ1P53863 YFL054CYFL054C 1941 nt11.83□□□□□ -0.52
JJJ1P53863 YLL053CYLL053C 459 nt11.82□□□□□ -0.52
JJJ1P53863 DIC1YLR348C 897 nt11.8□□□□□ -0.52
JJJ1P53863 BOR1YNL275W 1731 nt11.77□□□□□ -0.52
JJJ1P53863 CRR1YLR213C 1269 nt11.77□□□□□ -0.53
JJJ1P53863 YLR235CYLR235C 399 nt11.76□□□□□ -0.53
JJJ1P53863 FTR1YER145C 1215 nt11.74□□□□□ -0.53
JJJ1P53863 SPT8YLR055C 1809 nt11.74□□□□□ -0.53
JJJ1P53863 PTH1YHR189W 573 nt11.72□□□□□ -0.53
JJJ1P53863 YFL067WYFL067W 528 nt11.7□□□□□ -0.54
JJJ1P53863 ATF2YGR177C 1608 nt11.69□□□□□ -0.54
JJJ1P53863 GAL1YBR020W 1587 nt11.68□□□□□ -0.54
JJJ1P53863 TIM23YNR017W 669 nt11.67□□□□□ -0.54
JJJ1P53863 AQY1YPR192W 918 nt11.67□□□□□ -0.54
JJJ1P53863 HEM12YDR047W 1089 nt11.66□□□□□ -0.54
JJJ1P53863 TRM5YHR070W 1500 nt11.65□□□□□ -0.54
JJJ1P53863 YKL030WYKL030W 606 nt11.63□□□□□ -0.55
JJJ1P53863 DDR2YOL052C-A 186 nt11.63□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms