Protein–RNA interactions for Protein: P53064

RTF1, RNA polymerase-associated protein RTF1, yeastyeast

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTF1P53064 IMP2'YIL154C 1041 nt16.08■□□□□ 0.16
RTF1P53064 FMP45YDL222C 930 nt16.04■□□□□ 0.16
RTF1P53064 YPR011CYPR011C 981 nt16.02■□□□□ 0.16
RTF1P53064 YJL152WYJL152W 360 nt16■□□□□ 0.15
RTF1P53064 YLR236CYLR236C 324 nt16■□□□□ 0.15
RTF1P53064 YHR165W-AYHR165W-A 312 nt15.99■□□□□ 0.15
RTF1P53064 SIS1YNL007C 1059 nt15.95■□□□□ 0.14
RTF1P53064 YCH1YGR203W 447 nt15.89■□□□□ 0.13
RTF1P53064 IDH1YNL037C 1083 nt15.82■□□□□ 0.12
RTF1P53064 RPP2AYOL039W 321 nt15.82■□□□□ 0.12
RTF1P53064 TIR4YOR009W 1464 nt15.78■□□□□ 0.12
RTF1P53064 MEP2YNL142W 1500 nt15.74■□□□□ 0.11
RTF1P53064 LPX1YOR084W 1164 nt15.73■□□□□ 0.11
RTF1P53064 ERV46YAL042W 1248 nt15.71■□□□□ 0.11
RTF1P53064 PTP1YDL230W 1008 nt15.68■□□□□ 0.1
RTF1P53064 YDR433WYDR433W 441 nt15.68■□□□□ 0.1
RTF1P53064 ART5YGR068C 1761 nt15.67■□□□□ 0.1
RTF1P53064 SPT5YML010W 3192 nt15.67■□□□□ 0.1
RTF1P53064 PET9YBL030C 957 nt15.63■□□□□ 0.09
RTF1P53064 GBP2YCL011C 1284 nt15.63■□□□□ 0.09
RTF1P53064 CAC2YML102W 1407 nt15.6■□□□□ 0.09
RTF1P53064 MRPL8YJL063C 717 nt15.59■□□□□ 0.09
RTF1P53064 YMR057CYMR057C 372 nt15.59■□□□□ 0.09
RTF1P53064 YKR040CYKR040C 504 nt15.57■□□□□ 0.08
RTF1P53064 YCL048W-AYCL048W-A 240 nt15.56■□□□□ 0.08
RTF1P53064 GFD2YCL036W 1701 nt15.56■□□□□ 0.08
RTF1P53064 SPP1YPL138C 1062 nt15.54■□□□□ 0.08
RTF1P53064 DCW1YKL046C 1350 nt15.5■□□□□ 0.07
RTF1P53064 MXR2YCL033C 507 nt15.49■□□□□ 0.07
RTF1P53064 ADO1YJR105W 1023 nt15.42■□□□□ 0.06
RTF1P53064 TCD2YKL027W 1344 nt15.42■□□□□ 0.06
RTF1P53064 YEL076C-AYEL076C-A 651 nt15.39■□□□□ 0.05
RTF1P53064 YEL076CYEL076C 651 nt15.39■□□□□ 0.05
RTF1P53064 YLR464WYLR464W 651 nt15.39■□□□□ 0.05
RTF1P53064 EMI2YDR516C 1503 nt15.35■□□□□ 0.05
RTF1P53064 RTG1YOL067C 534 nt15.35■□□□□ 0.05
RTF1P53064 RTS2YOR077W 699 nt15.35■□□□□ 0.05
RTF1P53064 Q0182Q0182 405 nt15.3■□□□□ 0.04
RTF1P53064 FPS1YLL043W 2010 nt15.3■□□□□ 0.04
RTF1P53064 YDL221WYDL221W 552 nt15.26■□□□□ 0.03
RTF1P53064 YMR090WYMR090W 684 nt15.25■□□□□ 0.03
RTF1P53064 IRC15YPL017C 1500 nt15.25■□□□□ 0.03
RTF1P53064 DED1YOR204W 1815 nt15.24■□□□□ 0.03
RTF1P53064 RRD1YIL153W 1182 nt15.23■□□□□ 0.03
RTF1P53064 CUE1YMR264W 612 nt15.21■□□□□ 0.03
RTF1P53064 FRD1YEL047C 1413 nt15.18■□□□□ 0.02
RTF1P53064 GIS3YLR094C 1509 nt15.13■□□□□ 0.01
RTF1P53064 HUA1YGR268C 597 nt15.13■□□□□ 0.01
RTF1P53064 YCL042WYCL042W 360 nt15.13■□□□□ 0.01
RTF1P53064 FMT1YBL013W 1206 nt15.07■□□□□ 0
RTF1P53064 YIL100WYIL100W 354 nt15.06■□□□□ 0
RTF1P53064 SOR2YDL246C 1074 nt15.05■□□□□ -0
RTF1P53064 UBX6YJL048C 1191 nt15.05■□□□□ -0
RTF1P53064 SOR1YJR159W 1074 nt15.05■□□□□ -0
RTF1P53064 PTH1YHR189W 573 nt15.03■□□□□ -0
RTF1P53064 FMP52YER004W 696 nt15□□□□□ -0.01
RTF1P53064 YLR235CYLR235C 399 nt14.99□□□□□ -0.01
RTF1P53064 SDH1YKL148C 1923 nt14.99□□□□□ -0.01
RTF1P53064 SSA4YER103W 1929 nt14.98□□□□□ -0.01
RTF1P53064 SCC4YER147C 1875 nt14.97□□□□□ -0.01
RTF1P53064 YKL030WYKL030W 606 nt14.97□□□□□ -0.01
RTF1P53064 CWP1YKL096W 720 nt14.94□□□□□ -0.02
RTF1P53064 YBR220CYBR220C 1683 nt14.9□□□□□ -0.02
RTF1P53064 ADH2YMR303C 1047 nt14.87□□□□□ -0.03
RTF1P53064 YDR094WYDR094W 336 nt14.86□□□□□ -0.03
RTF1P53064 LCB1YMR296C 1677 nt14.86□□□□□ -0.03
RTF1P53064 PCM1YEL058W 1674 nt14.77□□□□□ -0.05
RTF1P53064 SNF6YHL025W 999 nt14.76□□□□□ -0.05
RTF1P53064 YNL195CYNL195C 786 nt14.75□□□□□ -0.05
RTF1P53064 YGR139WYGR139W 339 nt14.73□□□□□ -0.05
RTF1P53064 DIC1YLR348C 897 nt14.73□□□□□ -0.05
RTF1P53064 TIM23YNR017W 669 nt14.73□□□□□ -0.05
RTF1P53064 YLR179CYLR179C 606 nt14.64□□□□□ -0.07
RTF1P53064 RNQ1YCL028W 1218 nt14.63□□□□□ -0.07
RTF1P53064 tL(GAG)GtL(GAG)G 82 nt14.61□□□□□ -0.07
RTF1P53064 YIH1YCR059C 777 nt14.6□□□□□ -0.07
RTF1P53064 RRT12YCR045C 1476 nt14.59□□□□□ -0.07
RTF1P53064 YPR064WYPR064W 420 nt14.57□□□□□ -0.08
RTF1P53064 YFL015W-AYFL015W-A 318 nt14.56□□□□□ -0.08
RTF1P53064 YSC84YHR016C 1407 nt14.55□□□□□ -0.08
RTF1P53064 TAD3YLR316C 969 nt14.48□□□□□ -0.09
RTF1P53064 YFR018CYFR018C 1092 nt14.47□□□□□ -0.09
RTF1P53064 YLL053CYLL053C 459 nt14.46□□□□□ -0.09
RTF1P53064 YHL050CYHL050C 2094 nt14.46□□□□□ -0.09
RTF1P53064 WSC2YNL283C 1512 nt14.46□□□□□ -0.1
RTF1P53064 AHT1YHR093W 549 nt14.45□□□□□ -0.1
RTF1P53064 BIO4YNR057C 714 nt14.45□□□□□ -0.1
RTF1P53064 SIM1YIL123W 1431 nt14.44□□□□□ -0.1
RTF1P53064 PAU16YKL224C 372 nt14.42□□□□□ -0.1
RTF1P53064 RRT5YFR032C 870 nt14.41□□□□□ -0.1
RTF1P53064 FTR1YER145C 1215 nt14.39□□□□□ -0.11
RTF1P53064 AQY1YPR192W 918 nt14.39□□□□□ -0.11
RTF1P53064 SEC11YIR022W 504 nt14.35□□□□□ -0.11
RTF1P53064 PRE6YOL038W 765 nt14.35□□□□□ -0.11
RTF1P53064 GAL1YBR020W 1587 nt14.34□□□□□ -0.11
RTF1P53064 BDF1YLR399C 2061 nt14.3□□□□□ -0.12
RTF1P53064 TRM5YHR070W 1500 nt14.29□□□□□ -0.12
RTF1P53064 STB1YNL309W 1263 nt14.24□□□□□ -0.13
RTF1P53064 YFL066CYFL066C 1179 nt14.22□□□□□ -0.13
RTF1P53064 ERF2YLR246W 1080 nt14.22□□□□□ -0.13
Retrieved 100 of 7,029 protein–RNA pairs in 74.7 ms