Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 BDF1YLR399C 2061 nt9.76□□□□□ -0.85
VPS55P47111 SIS1YNL007C 1059 nt9.75□□□□□ -0.85
VPS55P47111 PAC11YDR488C 1602 nt9.74□□□□□ -0.85
VPS55P47111 YLR154C-GYLR154C-G 150 nt9.72□□□□□ -0.85
VPS55P47111 RPP2AYOL039W 321 nt9.72□□□□□ -0.85
VPS55P47111 PUS2YGL063W 1113 nt9.71□□□□□ -0.86
VPS55P47111 PTP1YDL230W 1008 nt9.63□□□□□ -0.87
VPS55P47111 IMP2'YIL154C 1041 nt9.61□□□□□ -0.87
VPS55P47111 YJL152WYJL152W 360 nt9.61□□□□□ -0.87
VPS55P47111 NVJ2YPR091C 2313 nt9.61□□□□□ -0.87
VPS55P47111 DCW1YKL046C 1350 nt9.6□□□□□ -0.87
VPS55P47111 TAT1YBR069C 1860 nt9.59□□□□□ -0.87
VPS55P47111 YCH1YGR203W 447 nt9.59□□□□□ -0.87
VPS55P47111 DSK2YMR276W 1122 nt9.57□□□□□ -0.88
VPS55P47111 TIR4YOR009W 1464 nt9.57□□□□□ -0.88
VPS55P47111 YJL225CYJL225C 5277 nt9.55□□□□□ -0.88
VPS55P47111 ART5YGR068C 1761 nt9.55□□□□□ -0.88
VPS55P47111 PET9YBL030C 957 nt9.55□□□□□ -0.88
VPS55P47111 CAC2YML102W 1407 nt9.53□□□□□ -0.88
VPS55P47111 EMI2YDR516C 1503 nt9.51□□□□□ -0.89
VPS55P47111 GFD2YCL036W 1701 nt9.51□□□□□ -0.89
VPS55P47111 YMR090WYMR090W 684 nt9.5□□□□□ -0.89
VPS55P47111 IDH1YNL037C 1083 nt9.49□□□□□ -0.89
VPS55P47111 YLR236CYLR236C 324 nt9.48□□□□□ -0.89
VPS55P47111 YPR011CYPR011C 981 nt9.47□□□□□ -0.89
VPS55P47111 FMP45YDL222C 930 nt9.46□□□□□ -0.9
VPS55P47111 YMR057CYMR057C 372 nt9.46□□□□□ -0.9
VPS55P47111 YDL221WYDL221W 552 nt9.45□□□□□ -0.9
VPS55P47111 RDN37-1RDN37-1 5354 nt9.44□□□□□ -0.9
VPS55P47111 RDN37-2RDN37-2 5354 nt9.44□□□□□ -0.9
VPS55P47111 YCL048W-AYCL048W-A 240 nt9.43□□□□□ -0.9
VPS55P47111 IRC15YPL017C 1500 nt9.4□□□□□ -0.91
VPS55P47111 MOT3YMR070W 1473 nt9.4□□□□□ -0.91
VPS55P47111 RTS2YOR077W 699 nt9.38□□□□□ -0.91
VPS55P47111 GBP2YCL011C 1284 nt9.38□□□□□ -0.91
VPS55P47111 ERV46YAL042W 1248 nt9.36□□□□□ -0.91
VPS55P47111 YDR433WYDR433W 441 nt9.35□□□□□ -0.91
VPS55P47111 CUE1YMR264W 612 nt9.33□□□□□ -0.92
VPS55P47111 LPX1YOR084W 1164 nt9.33□□□□□ -0.92
VPS55P47111 FPS1YLL043W 2010 nt9.32□□□□□ -0.92
VPS55P47111 SDH1YKL148C 1923 nt9.32□□□□□ -0.92
VPS55P47111 GIS3YLR094C 1509 nt9.31□□□□□ -0.92
VPS55P47111 YKR040CYKR040C 504 nt9.29□□□□□ -0.92
VPS55P47111 YBR220CYBR220C 1683 nt9.29□□□□□ -0.92
VPS55P47111 TCD2YKL027W 1344 nt9.29□□□□□ -0.92
VPS55P47111 SCC4YER147C 1875 nt9.28□□□□□ -0.92
VPS55P47111 YIL100WYIL100W 354 nt9.24□□□□□ -0.93
VPS55P47111 MXR2YCL033C 507 nt9.23□□□□□ -0.93
VPS55P47111 RRD1YIL153W 1182 nt9.21□□□□□ -0.94
VPS55P47111 DED1YOR204W 1815 nt9.18□□□□□ -0.94
VPS55P47111 SPP1YPL138C 1062 nt9.14□□□□□ -0.95
VPS55P47111 FMP52YER004W 696 nt9.13□□□□□ -0.95
VPS55P47111 YNL195CYNL195C 786 nt9.11□□□□□ -0.95
VPS55P47111 YCL042WYCL042W 360 nt9.11□□□□□ -0.95
VPS55P47111 FRD1YEL047C 1413 nt9.1□□□□□ -0.95
VPS55P47111 SOR2YDL246C 1074 nt9.09□□□□□ -0.95
VPS55P47111 MRPL8YJL063C 717 nt9.09□□□□□ -0.95
VPS55P47111 SOR1YJR159W 1074 nt9.09□□□□□ -0.95
VPS55P47111 FMT1YBL013W 1206 nt9.09□□□□□ -0.95
VPS55P47111 CWP1YKL096W 720 nt9.02□□□□□ -0.97
VPS55P47111 YSC84YHR016C 1407 nt9.02□□□□□ -0.97
VPS55P47111 SEC11YIR022W 504 nt9.01□□□□□ -0.97
VPS55P47111 RTG1YOL067C 534 nt9.01□□□□□ -0.97
VPS55P47111 ADO1YJR105W 1023 nt9□□□□□ -0.97
VPS55P47111 RRT12YCR045C 1476 nt9□□□□□ -0.97
VPS55P47111 YEL076C-AYEL076C-A 651 nt8.99□□□□□ -0.97
VPS55P47111 YEL076CYEL076C 651 nt8.99□□□□□ -0.97
VPS55P47111 YLR464WYLR464W 651 nt8.99□□□□□ -0.97
VPS55P47111 ADH2YMR303C 1047 nt8.99□□□□□ -0.97
VPS55P47111 PCM1YEL058W 1674 nt8.98□□□□□ -0.97
VPS55P47111 YLR235CYLR235C 399 nt8.97□□□□□ -0.97
VPS55P47111 YHL050CYHL050C 2094 nt8.96□□□□□ -0.97
VPS55P47111 SNF6YHL025W 999 nt8.96□□□□□ -0.98
VPS55P47111 GUT2YIL155C 1950 nt8.94□□□□□ -0.98
VPS55P47111 PTH1YHR189W 573 nt8.94□□□□□ -0.98
VPS55P47111 PCH2YBR186W 1695 nt8.94□□□□□ -0.98
VPS55P47111 UME6YDR207C 2511 nt8.92□□□□□ -0.98
VPS55P47111 YKL030WYKL030W 606 nt8.91□□□□□ -0.98
VPS55P47111 HUA1YGR268C 597 nt8.9□□□□□ -0.98
VPS55P47111 RNQ1YCL028W 1218 nt8.88□□□□□ -0.99
VPS55P47111 YIH1YCR059C 777 nt8.87□□□□□ -0.99
VPS55P47111 DIC1YLR348C 897 nt8.87□□□□□ -0.99
VPS55P47111 LCB1YMR296C 1677 nt8.84□□□□□ -0.99
VPS55P47111 SIM1YIL123W 1431 nt8.83□□□□□ -1
VPS55P47111 TIM23YNR017W 669 nt8.83□□□□□ -1
VPS55P47111 PIB2YGL023C 1908 nt8.82□□□□□ -1
VPS55P47111 BIO4YNR057C 714 nt8.81□□□□□ -1
VPS55P47111 YLR179CYLR179C 606 nt8.78□□□□□ -1
VPS55P47111 YLL053CYLL053C 459 nt8.77□□□□□ -1.01
VPS55P47111 BOP3YNL042W 1191 nt8.74□□□□□ -1.01
VPS55P47111 FTR1YER145C 1215 nt8.73□□□□□ -1.01
VPS55P47111 YPR064WYPR064W 420 nt8.73□□□□□ -1.01
VPS55P47111 AQY1YPR192W 918 nt8.73□□□□□ -1.01
VPS55P47111 NCP1YHR042W 2076 nt8.72□□□□□ -1.01
VPS55P47111 RTF1YGL244W 1677 nt8.72□□□□□ -1.01
VPS55P47111 ERF2YLR246W 1080 nt8.71□□□□□ -1.02
VPS55P47111 GAL1YBR020W 1587 nt8.69□□□□□ -1.02
VPS55P47111 tL(GAG)GtL(GAG)G 82 nt8.69□□□□□ -1.02
VPS55P47111 AHT1YHR093W 549 nt8.69□□□□□ -1.02
VPS55P47111 TAD3YLR316C 969 nt8.67□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 45.1 ms