Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 SUF10tP(AGG)N 72 nt9.66□□□□□ -0.86
LCB3P47013 BDF1YLR399C 2061 nt9.64□□□□□ -0.87
LCB3P47013 YDL221WYDL221W 552 nt9.61□□□□□ -0.87
LCB3P47013 YMR090WYMR090W 684 nt9.58□□□□□ -0.88
LCB3P47013 YBR220CYBR220C 1683 nt9.58□□□□□ -0.88
LCB3P47013 ART5YGR068C 1761 nt9.54□□□□□ -0.88
LCB3P47013 IRC15YPL017C 1500 nt9.53□□□□□ -0.88
LCB3P47013 GFD2YCL036W 1701 nt9.52□□□□□ -0.89
LCB3P47013 SDH1YKL148C 1923 nt9.52□□□□□ -0.89
LCB3P47013 TAT1YBR069C 1860 nt9.51□□□□□ -0.89
LCB3P47013 YOR139CYOR139C 393 nt9.5□□□□□ -0.89
LCB3P47013 YOL037CYOL037C 354 nt9.48□□□□□ -0.89
LCB3P47013 TIR4YOR009W 1464 nt9.47□□□□□ -0.89
LCB3P47013 GIS3YLR094C 1509 nt9.46□□□□□ -0.9
LCB3P47013 NPL3YDR432W 1245 nt9.45□□□□□ -0.9
LCB3P47013 PET9YBL030C 957 nt9.45□□□□□ -0.9
LCB3P47013 SCC4YER147C 1875 nt9.43□□□□□ -0.9
LCB3P47013 RTS2YOR077W 699 nt9.42□□□□□ -0.9
LCB3P47013 YCH1YGR203W 447 nt9.4□□□□□ -0.9
LCB3P47013 YLR154C-GYLR154C-G 150 nt9.38□□□□□ -0.91
LCB3P47013 YMR057CYMR057C 372 nt9.37□□□□□ -0.91
LCB3P47013 CUE1YMR264W 612 nt9.33□□□□□ -0.92
LCB3P47013 YJL152WYJL152W 360 nt9.31□□□□□ -0.92
LCB3P47013 YLR281CYLR281C 468 nt9.3□□□□□ -0.92
LCB3P47013 WHI5YOR083W 888 nt9.29□□□□□ -0.92
LCB3P47013 YSC84YHR016C 1407 nt9.22□□□□□ -0.93
LCB3P47013 SEC11YIR022W 504 nt9.22□□□□□ -0.93
LCB3P47013 PCH2YBR186W 1695 nt9.22□□□□□ -0.93
LCB3P47013 YHL050CYHL050C 2094 nt9.2□□□□□ -0.94
LCB3P47013 RRT12YCR045C 1476 nt9.19□□□□□ -0.94
LCB3P47013 YIL100WYIL100W 354 nt9.18□□□□□ -0.94
LCB3P47013 GUT2YIL155C 1950 nt9.18□□□□□ -0.94
LCB3P47013 YLR236CYLR236C 324 nt9.18□□□□□ -0.94
LCB3P47013 YCL048W-AYCL048W-A 240 nt9.18□□□□□ -0.94
LCB3P47013 tM(CAU)CtM(CAU)C 72 nt9.15□□□□□ -0.94
LCB3P47013 IMT4tM(CAU)E 72 nt9.15□□□□□ -0.94
LCB3P47013 IMT3tM(CAU)J3 72 nt9.15□□□□□ -0.94
LCB3P47013 IMT1tM(CAU)O1 72 nt9.15□□□□□ -0.94
LCB3P47013 IMT2tM(CAU)P 72 nt9.15□□□□□ -0.94
LCB3P47013 PUS2YGL063W 1113 nt9.12□□□□□ -0.95
LCB3P47013 IDH1YNL037C 1083 nt9.1□□□□□ -0.95
LCB3P47013 YNL195CYNL195C 786 nt9.1□□□□□ -0.95
LCB3P47013 PIB2YGL023C 1908 nt9.09□□□□□ -0.95
LCB3P47013 UME6YDR207C 2511 nt9.08□□□□□ -0.96
LCB3P47013 YPR011CYPR011C 981 nt9.08□□□□□ -0.96
LCB3P47013 YJL225CYJL225C 5277 nt9.07□□□□□ -0.96
LCB3P47013 RRD1YIL153W 1182 nt9.07□□□□□ -0.96
LCB3P47013 DSK2YMR276W 1122 nt9.07□□□□□ -0.96
LCB3P47013 GBP2YCL011C 1284 nt9.07□□□□□ -0.96
LCB3P47013 IMP2'YIL154C 1041 nt9.05□□□□□ -0.96
LCB3P47013 DED1YOR204W 1815 nt9.03□□□□□ -0.96
LCB3P47013 RTF1YGL244W 1677 nt9□□□□□ -0.97
LCB3P47013 TCD2YKL027W 1344 nt8.98□□□□□ -0.97
LCB3P47013 FMP45YDL222C 930 nt8.97□□□□□ -0.97
LCB3P47013 YDR433WYDR433W 441 nt8.96□□□□□ -0.98
LCB3P47013 FMT1YBL013W 1206 nt8.96□□□□□ -0.98
LCB3P47013 NCP1YHR042W 2076 nt8.96□□□□□ -0.98
LCB3P47013 RDN37-1RDN37-1 5354 nt8.95□□□□□ -0.98
LCB3P47013 RDN37-2RDN37-2 5354 nt8.95□□□□□ -0.98
LCB3P47013 FMP52YER004W 696 nt8.94□□□□□ -0.98
LCB3P47013 BOP3YNL042W 1191 nt8.94□□□□□ -0.98
LCB3P47013 MXR2YCL033C 507 nt8.94□□□□□ -0.98
LCB3P47013 ERV46YAL042W 1248 nt8.92□□□□□ -0.98
LCB3P47013 LPX1YOR084W 1164 nt8.92□□□□□ -0.98
LCB3P47013 LCB1YMR296C 1677 nt8.9□□□□□ -0.98
LCB3P47013 PTK1YKL198C 1989 nt8.9□□□□□ -0.99
LCB3P47013 PCM1YEL058W 1674 nt8.89□□□□□ -0.99
LCB3P47013 YKR040CYKR040C 504 nt8.86□□□□□ -0.99
LCB3P47013 ADH2YMR303C 1047 nt8.86□□□□□ -0.99
LCB3P47013 SOR2YDL246C 1074 nt8.85□□□□□ -0.99
LCB3P47013 SOR1YJR159W 1074 nt8.85□□□□□ -0.99
LCB3P47013 CWP1YKL096W 720 nt8.85□□□□□ -0.99
LCB3P47013 FRD1YEL047C 1413 nt8.81□□□□□ -1
LCB3P47013 SIM1YIL123W 1431 nt8.8□□□□□ -1
LCB3P47013 SNF6YHL025W 999 nt8.79□□□□□ -1
LCB3P47013 YCL042WYCL042W 360 nt8.79□□□□□ -1
LCB3P47013 RPM1RPM1 483 nt8.78□□□□□ -1
LCB3P47013 BIO4YNR057C 714 nt8.77□□□□□ -1.01
LCB3P47013 LYS4YDR234W 2082 nt8.74□□□□□ -1.01
LCB3P47013 YIH1YCR059C 777 nt8.71□□□□□ -1.02
LCB3P47013 SPP1YPL138C 1062 nt8.71□□□□□ -1.02
LCB3P47013 BOR1YNL275W 1731 nt8.7□□□□□ -1.02
LCB3P47013 RNQ1YCL028W 1218 nt8.69□□□□□ -1.02
LCB3P47013 YFL054CYFL054C 1941 nt8.69□□□□□ -1.02
LCB3P47013 YLL053CYLL053C 459 nt8.66□□□□□ -1.02
LCB3P47013 SPT8YLR055C 1809 nt8.64□□□□□ -1.03
LCB3P47013 MCH5YOR306C 1566 nt8.62□□□□□ -1.03
LCB3P47013 CRR1YLR213C 1269 nt8.62□□□□□ -1.03
LCB3P47013 ERF2YLR246W 1080 nt8.62□□□□□ -1.03
LCB3P47013 DIC1YLR348C 897 nt8.62□□□□□ -1.03
LCB3P47013 PTH1YHR189W 573 nt8.6□□□□□ -1.03
LCB3P47013 ATF2YGR177C 1608 nt8.59□□□□□ -1.03
LCB3P47013 FTR1YER145C 1215 nt8.58□□□□□ -1.04
LCB3P47013 GAL1YBR020W 1587 nt8.56□□□□□ -1.04
LCB3P47013 TRM5YHR070W 1500 nt8.54□□□□□ -1.04
LCB3P47013 YLR235CYLR235C 399 nt8.54□□□□□ -1.04
LCB3P47013 MIC10YCL057C-A 294 nt8.54□□□□□ -1.04
LCB3P47013 YFL067WYFL067W 528 nt8.52□□□□□ -1.05
LCB3P47013 SWE1YJL187C 2460 nt8.52□□□□□ -1.05
LCB3P47013 SNG1YGR197C 1644 nt8.51□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms