Protein–RNA interactions for Protein: P41234

Abca2, ATP-binding cassette sub-family A member 2, mousemouse

Predictions only

Length 2,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca2P41234 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Abca2P41234 Gm27322-201ENSMUST00000184007 104 ntBASIC23.47■■□□□ 1.35
Abca2P41234 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Abca2P41234 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.44■■□□□ 1.34
Abca2P41234 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Abca2P41234 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.42■■□□□ 1.34
Abca2P41234 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Abca2P41234 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Abca2P41234 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Abca2P41234 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Abca2P41234 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.35■■□□□ 1.33
Abca2P41234 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.34■■□□□ 1.33
Abca2P41234 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Abca2P41234 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Abca2P41234 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Abca2P41234 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Abca2P41234 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Abca2P41234 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Abca2P41234 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Abca2P41234 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.22■■□□□ 1.31
Abca2P41234 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Abca2P41234 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Abca2P41234 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Abca2P41234 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Abca2P41234 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.11■■□□□ 1.29
Abca2P41234 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.08■■□□□ 1.29
Abca2P41234 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Abca2P41234 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.07■■□□□ 1.28
Abca2P41234 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.06■■□□□ 1.28
Abca2P41234 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Abca2P41234 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Abca2P41234 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.04■■□□□ 1.28
Abca2P41234 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Abca2P41234 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Abca2P41234 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Abca2P41234 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Abca2P41234 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Abca2P41234 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.93■■□□□ 1.26
Abca2P41234 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Abca2P41234 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Abca2P41234 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.91■■□□□ 1.26
Abca2P41234 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Abca2P41234 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Abca2P41234 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Abca2P41234 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.87■■□□□ 1.25
Abca2P41234 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.86■■□□□ 1.25
Abca2P41234 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.86■■□□□ 1.25
Abca2P41234 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.82■■□□□ 1.24
Abca2P41234 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Abca2P41234 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.81■■□□□ 1.24
Abca2P41234 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Abca2P41234 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Abca2P41234 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Abca2P41234 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Abca2P41234 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Abca2P41234 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Abca2P41234 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Abca2P41234 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Abca2P41234 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Abca2P41234 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Abca2P41234 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.68■■□□□ 1.22
Abca2P41234 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Abca2P41234 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Abca2P41234 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Abca2P41234 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Abca2P41234 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.64■■□□□ 1.21
Abca2P41234 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Abca2P41234 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Abca2P41234 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
Abca2P41234 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Abca2P41234 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Abca2P41234 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Abca2P41234 Gm16148-201ENSMUST00000119653 893 ntBASIC22.56■■□□□ 1.2
Abca2P41234 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Abca2P41234 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Abca2P41234 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Abca2P41234 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Abca2P41234 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.51■■□□□ 1.19
Abca2P41234 Gm45855-201ENSMUST00000212546 880 ntBASIC22.49■■□□□ 1.19
Abca2P41234 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Abca2P41234 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Abca2P41234 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Abca2P41234 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Abca2P41234 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Abca2P41234 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Abca2P41234 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Abca2P41234 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Abca2P41234 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Abca2P41234 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Abca2P41234 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Abca2P41234 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Abca2P41234 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Abca2P41234 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Abca2P41234 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Abca2P41234 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.34■■□□□ 1.17
Abca2P41234 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.33■■□□□ 1.17
Abca2P41234 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Abca2P41234 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Abca2P41234 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Abca2P41234 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms