Protein–RNA interactions for Protein: P40339

RFC4, Replication factor C subunit 4, yeastyeast

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC4P40339 PTP1YDL230W 1008 nt11.08□□□□□ -0.64
RFC4P40339 SUF2tP(AGG)C 72 nt11.08□□□□□ -0.64
RFC4P40339 SUF10tP(AGG)N 72 nt11.08□□□□□ -0.64
RFC4P40339 CAC2YML102W 1407 nt11.08□□□□□ -0.64
RFC4P40339 RPP2AYOL039W 321 nt11.07□□□□□ -0.64
RFC4P40339 Q0182Q0182 405 nt11.03□□□□□ -0.64
RFC4P40339 PCH2YBR186W 1695 nt10.99□□□□□ -0.65
RFC4P40339 SEC11YIR022W 504 nt10.99□□□□□ -0.65
RFC4P40339 SIS1YNL007C 1059 nt10.99□□□□□ -0.65
RFC4P40339 SCC4YER147C 1875 nt10.98□□□□□ -0.65
RFC4P40339 YLR281CYLR281C 468 nt10.98□□□□□ -0.65
RFC4P40339 GUT2YIL155C 1950 nt10.96□□□□□ -0.66
RFC4P40339 tM(CAU)CtM(CAU)C 72 nt10.94□□□□□ -0.66
RFC4P40339 IMT4tM(CAU)E 72 nt10.94□□□□□ -0.66
RFC4P40339 IMT3tM(CAU)J3 72 nt10.94□□□□□ -0.66
RFC4P40339 IMT1tM(CAU)O1 72 nt10.94□□□□□ -0.66
RFC4P40339 IMT2tM(CAU)P 72 nt10.94□□□□□ -0.66
RFC4P40339 WHI5YOR083W 888 nt10.94□□□□□ -0.66
RFC4P40339 IRC15YPL017C 1500 nt10.92□□□□□ -0.66
RFC4P40339 YLR154C-GYLR154C-G 150 nt10.91□□□□□ -0.66
RFC4P40339 GIS3YLR094C 1509 nt10.88□□□□□ -0.67
RFC4P40339 PUS2YGL063W 1113 nt10.87□□□□□ -0.67
RFC4P40339 YJL225CYJL225C 5277 nt10.83□□□□□ -0.68
RFC4P40339 TIR4YOR009W 1464 nt10.81□□□□□ -0.68
RFC4P40339 ART5YGR068C 1761 nt10.81□□□□□ -0.68
RFC4P40339 YJL152WYJL152W 360 nt10.81□□□□□ -0.68
RFC4P40339 FPS1YLL043W 2010 nt10.79□□□□□ -0.68
RFC4P40339 PIB2YGL023C 1908 nt10.78□□□□□ -0.68
RFC4P40339 YSC84YHR016C 1407 nt10.77□□□□□ -0.68
RFC4P40339 NVJ2YPR091C 2313 nt10.76□□□□□ -0.69
RFC4P40339 GFD2YCL036W 1701 nt10.76□□□□□ -0.69
RFC4P40339 YCH1YGR203W 447 nt10.76□□□□□ -0.69
RFC4P40339 PET9YBL030C 957 nt10.76□□□□□ -0.69
RFC4P40339 YHL050CYHL050C 2094 nt10.71□□□□□ -0.69
RFC4P40339 DSK2YMR276W 1122 nt10.71□□□□□ -0.69
RFC4P40339 IMP2'YIL154C 1041 nt10.7□□□□□ -0.7
RFC4P40339 YMR057CYMR057C 372 nt10.69□□□□□ -0.7
RFC4P40339 YPR011CYPR011C 981 nt10.68□□□□□ -0.7
RFC4P40339 RTF1YGL244W 1677 nt10.68□□□□□ -0.7
RFC4P40339 YLR236CYLR236C 324 nt10.67□□□□□ -0.7
RFC4P40339 RTS2YOR077W 699 nt10.67□□□□□ -0.7
RFC4P40339 IDH1YNL037C 1083 nt10.63□□□□□ -0.71
RFC4P40339 CUE1YMR264W 612 nt10.62□□□□□ -0.71
RFC4P40339 RRT12YCR045C 1476 nt10.61□□□□□ -0.71
RFC4P40339 BOP3YNL042W 1191 nt10.6□□□□□ -0.71
RFC4P40339 FMP45YDL222C 930 nt10.59□□□□□ -0.71
RFC4P40339 YCL048W-AYCL048W-A 240 nt10.59□□□□□ -0.71
RFC4P40339 YNL195CYNL195C 786 nt10.57□□□□□ -0.72
RFC4P40339 GBP2YCL011C 1284 nt10.54□□□□□ -0.72
RFC4P40339 PTK1YKL198C 1989 nt10.54□□□□□ -0.72
RFC4P40339 YIL100WYIL100W 354 nt10.5□□□□□ -0.73
RFC4P40339 LPX1YOR084W 1164 nt10.5□□□□□ -0.73
RFC4P40339 MOT3YMR070W 1473 nt10.49□□□□□ -0.73
RFC4P40339 YDR433WYDR433W 441 nt10.49□□□□□ -0.73
RFC4P40339 ERV46YAL042W 1248 nt10.49□□□□□ -0.73
RFC4P40339 RDN37-1RDN37-1 5354 nt10.46□□□□□ -0.73
RFC4P40339 RDN37-2RDN37-2 5354 nt10.46□□□□□ -0.73
RFC4P40339 TCD2YKL027W 1344 nt10.42□□□□□ -0.74
RFC4P40339 MXR2YCL033C 507 nt10.42□□□□□ -0.74
RFC4P40339 YKR040CYKR040C 504 nt10.41□□□□□ -0.74
RFC4P40339 NCP1YHR042W 2076 nt10.4□□□□□ -0.74
RFC4P40339 RRD1YIL153W 1182 nt10.4□□□□□ -0.74
RFC4P40339 DED1YOR204W 1815 nt10.38□□□□□ -0.75
RFC4P40339 SPP1YPL138C 1062 nt10.3□□□□□ -0.76
RFC4P40339 YFL054CYFL054C 1941 nt10.29□□□□□ -0.76
RFC4P40339 FMT1YBL013W 1206 nt10.28□□□□□ -0.76
RFC4P40339 FMP52YER004W 696 nt10.26□□□□□ -0.77
RFC4P40339 SPT8YLR055C 1809 nt10.25□□□□□ -0.77
RFC4P40339 FRD1YEL047C 1413 nt10.24□□□□□ -0.77
RFC4P40339 BOR1YNL275W 1731 nt10.24□□□□□ -0.77
RFC4P40339 SOR2YDL246C 1074 nt10.22□□□□□ -0.77
RFC4P40339 SOR1YJR159W 1074 nt10.22□□□□□ -0.77
RFC4P40339 YCL042WYCL042W 360 nt10.22□□□□□ -0.77
RFC4P40339 LCB1YMR296C 1677 nt10.18□□□□□ -0.78
RFC4P40339 CWP1YKL096W 720 nt10.17□□□□□ -0.78
RFC4P40339 ADH2YMR303C 1047 nt10.16□□□□□ -0.78
RFC4P40339 PCM1YEL058W 1674 nt10.14□□□□□ -0.79
RFC4P40339 RTG1YOL067C 534 nt10.1□□□□□ -0.79
RFC4P40339 SNF6YHL025W 999 nt10.09□□□□□ -0.79
RFC4P40339 MRPL8YJL063C 717 nt10.09□□□□□ -0.79
RFC4P40339 PTH1YHR189W 573 nt10.07□□□□□ -0.8
RFC4P40339 YEL076C-AYEL076C-A 651 nt10.04□□□□□ -0.8
RFC4P40339 YEL076CYEL076C 651 nt10.04□□□□□ -0.8
RFC4P40339 YLR464WYLR464W 651 nt10.04□□□□□ -0.8
RFC4P40339 UME6YDR207C 2511 nt10.04□□□□□ -0.8
RFC4P40339 SWE1YJL187C 2460 nt10.04□□□□□ -0.8
RFC4P40339 YLR235CYLR235C 399 nt10.03□□□□□ -0.8
RFC4P40339 RPM1RPM1 483 nt10.01□□□□□ -0.81
RFC4P40339 LYS4YDR234W 2082 nt10□□□□□ -0.81
RFC4P40339 YIH1YCR059C 777 nt9.99□□□□□ -0.81
RFC4P40339 ADO1YJR105W 1023 nt9.99□□□□□ -0.81
RFC4P40339 SIM1YIL123W 1431 nt9.99□□□□□ -0.81
RFC4P40339 DIC1YLR348C 897 nt9.98□□□□□ -0.81
RFC4P40339 RNQ1YCL028W 1218 nt9.98□□□□□ -0.81
RFC4P40339 HSP60YLR259C 1719 nt9.98□□□□□ -0.81
RFC4P40339 YKL030WYKL030W 606 nt9.97□□□□□ -0.81
RFC4P40339 BIO4YNR057C 714 nt9.96□□□□□ -0.82
RFC4P40339 HUA1YGR268C 597 nt9.92□□□□□ -0.82
RFC4P40339 TIM23YNR017W 669 nt9.91□□□□□ -0.82
RFC4P40339 YLL053CYLL053C 459 nt9.9□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms