Protein–RNA interactions for Protein: P40003

VAB2, Biogenesis of lysosome-related organelles complex 1 subunit VAB2, yeastyeast

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAB2P40003 YLR236CYLR236C 324 nt14.05□□□□□ -0.16
VAB2P40003 SUF2tP(AGG)C 72 nt13.99□□□□□ -0.17
VAB2P40003 SUF10tP(AGG)N 72 nt13.99□□□□□ -0.17
VAB2P40003 ALF1YNL148C 765 nt13.94□□□□□ -0.18
VAB2P40003 ADO1YJR105W 1023 nt13.91□□□□□ -0.18
VAB2P40003 YJL152WYJL152W 360 nt13.9□□□□□ -0.18
VAB2P40003 IDH1YNL037C 1083 nt13.82□□□□□ -0.2
VAB2P40003 LPX1YOR084W 1164 nt13.82□□□□□ -0.2
VAB2P40003 ERV46YAL042W 1248 nt13.81□□□□□ -0.2
VAB2P40003 YEL076C-AYEL076C-A 651 nt13.79□□□□□ -0.2
VAB2P40003 YEL076CYEL076C 651 nt13.79□□□□□ -0.2
VAB2P40003 YLR464WYLR464W 651 nt13.79□□□□□ -0.2
VAB2P40003 YDR433WYDR433W 441 nt13.73□□□□□ -0.21
VAB2P40003 SPP1YPL138C 1062 nt13.72□□□□□ -0.21
VAB2P40003 YPS1YLR120C 1710 nt13.68□□□□□ -0.22
VAB2P40003 YDR095CYDR095C 411 nt13.68□□□□□ -0.22
VAB2P40003 YKR040CYKR040C 504 nt13.68□□□□□ -0.22
VAB2P40003 SIS1YNL007C 1059 nt13.68□□□□□ -0.22
VAB2P40003 UBX6YJL048C 1191 nt13.67□□□□□ -0.22
VAB2P40003 RTG1YOL067C 534 nt13.67□□□□□ -0.22
VAB2P40003 GBP2YCL011C 1284 nt13.62□□□□□ -0.23
VAB2P40003 YHR165W-AYHR165W-A 312 nt13.55□□□□□ -0.24
VAB2P40003 TIR4YOR009W 1464 nt13.55□□□□□ -0.24
VAB2P40003 HUA1YGR268C 597 nt13.51□□□□□ -0.25
VAB2P40003 MXR2YCL033C 507 nt13.5□□□□□ -0.25
VAB2P40003 RPP2AYOL039W 321 nt13.46□□□□□ -0.25
VAB2P40003 CAC2YML102W 1407 nt13.45□□□□□ -0.26
VAB2P40003 YCL048W-AYCL048W-A 240 nt13.44□□□□□ -0.26
VAB2P40003 YDR094WYDR094W 336 nt13.4□□□□□ -0.26
VAB2P40003 TCD2YKL027W 1344 nt13.39□□□□□ -0.27
VAB2P40003 PET9YBL030C 957 nt13.38□□□□□ -0.27
VAB2P40003 YMR057CYMR057C 372 nt13.37□□□□□ -0.27
VAB2P40003 ART5YGR068C 1761 nt13.37□□□□□ -0.27
VAB2P40003 PTP1YDL230W 1008 nt13.27□□□□□ -0.29
VAB2P40003 GFD2YCL036W 1701 nt13.24□□□□□ -0.29
VAB2P40003 FRD1YEL047C 1413 nt13.22□□□□□ -0.29
VAB2P40003 YFL015W-AYFL015W-A 318 nt13.21□□□□□ -0.29
VAB2P40003 MEP2YNL142W 1500 nt13.18□□□□□ -0.3
VAB2P40003 YCL042WYCL042W 360 nt13.18□□□□□ -0.3
VAB2P40003 YKL030WYKL030W 606 nt13.17□□□□□ -0.3
VAB2P40003 DED1YOR204W 1815 nt13.16□□□□□ -0.3
VAB2P40003 PTH1YHR189W 573 nt13.16□□□□□ -0.3
VAB2P40003 YLR235CYLR235C 399 nt13.16□□□□□ -0.3
VAB2P40003 RRD1YIL153W 1182 nt13.12□□□□□ -0.31
VAB2P40003 FPS1YLL043W 2010 nt13.07□□□□□ -0.32
VAB2P40003 SOR2YDL246C 1074 nt13.05□□□□□ -0.32
VAB2P40003 SOR1YJR159W 1074 nt13.05□□□□□ -0.32
VAB2P40003 LCB1YMR296C 1677 nt13.02□□□□□ -0.32
VAB2P40003 RTS2YOR077W 699 nt13.01□□□□□ -0.33
VAB2P40003 FMT1YBL013W 1206 nt12.99□□□□□ -0.33
VAB2P40003 DCW1YKL046C 1350 nt12.96□□□□□ -0.33
VAB2P40003 FMP52YER004W 696 nt12.94□□□□□ -0.34
VAB2P40003 SPT5YML010W 3192 nt12.93□□□□□ -0.34
VAB2P40003 CUE1YMR264W 612 nt12.93□□□□□ -0.34
VAB2P40003 RRT5YFR032C 870 nt12.89□□□□□ -0.35
VAB2P40003 tL(GAG)GtL(GAG)G 82 nt12.88□□□□□ -0.35
VAB2P40003 CWP1YKL096W 720 nt12.88□□□□□ -0.35
VAB2P40003 PAU16YKL224C 372 nt12.88□□□□□ -0.35
VAB2P40003 EMI2YDR516C 1503 nt12.88□□□□□ -0.35
VAB2P40003 YFR018CYFR018C 1092 nt12.87□□□□□ -0.35
VAB2P40003 IRC15YPL017C 1500 nt12.86□□□□□ -0.35
VAB2P40003 TIM23YNR017W 669 nt12.85□□□□□ -0.35
VAB2P40003 SBA1YKL117W 651 nt12.83□□□□□ -0.36
VAB2P40003 YMR090WYMR090W 684 nt12.83□□□□□ -0.36
VAB2P40003 YDL221WYDL221W 552 nt12.82□□□□□ -0.36
VAB2P40003 YIL100WYIL100W 354 nt12.82□□□□□ -0.36
VAB2P40003 ADH2YMR303C 1047 nt12.8□□□□□ -0.36
VAB2P40003 DIC1YLR348C 897 nt12.77□□□□□ -0.37
VAB2P40003 YLR179CYLR179C 606 nt12.76□□□□□ -0.37
VAB2P40003 YPR064WYPR064W 420 nt12.76□□□□□ -0.37
VAB2P40003 GIS3YLR094C 1509 nt12.76□□□□□ -0.37
VAB2P40003 SNF6YHL025W 999 nt12.71□□□□□ -0.37
VAB2P40003 PRE6YOL038W 765 nt12.71□□□□□ -0.37
VAB2P40003 TAD3YLR316C 969 nt12.68□□□□□ -0.38
VAB2P40003 PCM1YEL058W 1674 nt12.66□□□□□ -0.38
VAB2P40003 RNQ1YCL028W 1218 nt12.63□□□□□ -0.39
VAB2P40003 YIH1YCR059C 777 nt12.58□□□□□ -0.4
VAB2P40003 SCC4YER147C 1875 nt12.58□□□□□ -0.4
VAB2P40003 AHT1YHR093W 549 nt12.58□□□□□ -0.4
VAB2P40003 WSC2YNL283C 1512 nt12.57□□□□□ -0.4
VAB2P40003 SDH1YKL148C 1923 nt12.55□□□□□ -0.4
VAB2P40003 NAT4YMR069W 858 nt12.55□□□□□ -0.4
VAB2P40003 YFL066CYFL066C 1179 nt12.52□□□□□ -0.41
VAB2P40003 PEX25YPL112C 1185 nt12.52□□□□□ -0.41
VAB2P40003 YNL195CYNL195C 786 nt12.5□□□□□ -0.41
VAB2P40003 AQY1YPR192W 918 nt12.48□□□□□ -0.41
VAB2P40003 GLK1YCL040W 1503 nt12.47□□□□□ -0.41
VAB2P40003 YLL053CYLL053C 459 nt12.43□□□□□ -0.42
VAB2P40003 YSC84YHR016C 1407 nt12.42□□□□□ -0.42
VAB2P40003 YSP3YOR003W 1437 nt12.4□□□□□ -0.42
VAB2P40003 YLR415CYLR415C 339 nt12.4□□□□□ -0.42
VAB2P40003 YBR220CYBR220C 1683 nt12.4□□□□□ -0.42
VAB2P40003 SSA4YER103W 1929 nt12.4□□□□□ -0.42
VAB2P40003 YNL115CYNL115C 1935 nt12.39□□□□□ -0.43
VAB2P40003 FTR1YER145C 1215 nt12.38□□□□□ -0.43
VAB2P40003 BDH1YAL060W 1149 nt12.38□□□□□ -0.43
VAB2P40003 MSF1YPR047W 1410 nt12.37□□□□□ -0.43
VAB2P40003 GAL1YBR020W 1587 nt12.35□□□□□ -0.43
VAB2P40003 BIO4YNR057C 714 nt12.33□□□□□ -0.44
VAB2P40003 SIM1YIL123W 1431 nt12.31□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 38 ms