Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YDR095CYDR095C 411 nt21.52■■□□□ 1.04
SSN2P38931 YJL152WYJL152W 360 nt21.51■■□□□ 1.03
SSN2P38931 SUF2tP(AGG)C 72 nt21.44■■□□□ 1.02
SSN2P38931 SUF10tP(AGG)N 72 nt21.44■■□□□ 1.02
SSN2P38931 LPX1YOR084W 1164 nt21.38■■□□□ 1.01
SSN2P38931 YHR165W-AYHR165W-A 312 nt21.37■■□□□ 1.01
SSN2P38931 YCH1YGR203W 447 nt21.36■■□□□ 1.01
SSN2P38931 TIR4YOR009W 1464 nt21.35■■□□□ 1.01
SSN2P38931 SPP1YPL138C 1062 nt21.22■□□□□ 0.99
SSN2P38931 IMP2'YIL154C 1041 nt21.21■□□□□ 0.99
SSN2P38931 SIS1YNL007C 1059 nt21.18■□□□□ 0.98
SSN2P38931 IDH1YNL037C 1083 nt21.13■□□□□ 0.97
SSN2P38931 YDR433WYDR433W 441 nt21.09■□□□□ 0.97
SSN2P38931 MXR2YCL033C 507 nt21.08■□□□□ 0.97
SSN2P38931 ART5YGR068C 1761 nt21.05■□□□□ 0.96
SSN2P38931 ERV46YAL042W 1248 nt21.04■□□□□ 0.96
SSN2P38931 RPP2AYOL039W 321 nt21.04■□□□□ 0.96
SSN2P38931 PTP1YDL230W 1008 nt21.01■□□□□ 0.95
SSN2P38931 GBP2YCL011C 1284 nt20.97■□□□□ 0.95
SSN2P38931 MEP2YNL142W 1500 nt20.97■□□□□ 0.95
SSN2P38931 GFD2YCL036W 1701 nt20.95■□□□□ 0.94
SSN2P38931 YMR057CYMR057C 372 nt20.95■□□□□ 0.94
SSN2P38931 DCW1YKL046C 1350 nt20.92■□□□□ 0.94
SSN2P38931 RTS2YOR077W 699 nt20.9■□□□□ 0.94
SSN2P38931 SPT5YML010W 3192 nt20.86■□□□□ 0.93
SSN2P38931 YCL048W-AYCL048W-A 240 nt20.83■□□□□ 0.93
SSN2P38931 CAC2YML102W 1407 nt20.81■□□□□ 0.92
SSN2P38931 RTG1YOL067C 534 nt20.77■□□□□ 0.91
SSN2P38931 YKR040CYKR040C 504 nt20.73■□□□□ 0.91
SSN2P38931 PET9YBL030C 957 nt20.71■□□□□ 0.91
SSN2P38931 YEL076C-AYEL076C-A 651 nt20.7■□□□□ 0.9
SSN2P38931 YEL076CYEL076C 651 nt20.7■□□□□ 0.9
SSN2P38931 YLR464WYLR464W 651 nt20.7■□□□□ 0.9
SSN2P38931 MRPL8YJL063C 717 nt20.7■□□□□ 0.9
SSN2P38931 TCD2YKL027W 1344 nt20.59■□□□□ 0.89
SSN2P38931 FPS1YLL043W 2010 nt20.55■□□□□ 0.88
SSN2P38931 DED1YOR204W 1815 nt20.55■□□□□ 0.88
SSN2P38931 EMI2YDR516C 1503 nt20.5■□□□□ 0.87
SSN2P38931 RRD1YIL153W 1182 nt20.5■□□□□ 0.87
SSN2P38931 UBX6YJL048C 1191 nt20.5■□□□□ 0.87
SSN2P38931 PTH1YHR189W 573 nt20.49■□□□□ 0.87
SSN2P38931 IRC15YPL017C 1500 nt20.49■□□□□ 0.87
SSN2P38931 ADO1YJR105W 1023 nt20.47■□□□□ 0.87
SSN2P38931 FRD1YEL047C 1413 nt20.45■□□□□ 0.86
SSN2P38931 YDL221WYDL221W 552 nt20.37■□□□□ 0.85
SSN2P38931 FMT1YBL013W 1206 nt20.34■□□□□ 0.85
SSN2P38931 CUE1YMR264W 612 nt20.31■□□□□ 0.84
SSN2P38931 GIS3YLR094C 1509 nt20.27■□□□□ 0.84
SSN2P38931 YCL042WYCL042W 360 nt20.21■□□□□ 0.83
SSN2P38931 SOR2YDL246C 1074 nt20.19■□□□□ 0.82
SSN2P38931 SOR1YJR159W 1074 nt20.19■□□□□ 0.82
SSN2P38931 HUA1YGR268C 597 nt20.18■□□□□ 0.82
SSN2P38931 CWP1YKL096W 720 nt20.1■□□□□ 0.81
SSN2P38931 YIL100WYIL100W 354 nt20.06■□□□□ 0.8
SSN2P38931 ADH2YMR303C 1047 nt20.03■□□□□ 0.8
SSN2P38931 LCB1YMR296C 1677 nt20.03■□□□□ 0.8
SSN2P38931 SSA4YER103W 1929 nt20.02■□□□□ 0.8
SSN2P38931 YMR090WYMR090W 684 nt20.02■□□□□ 0.79
SSN2P38931 SDH1YKL148C 1923 nt19.99■□□□□ 0.79
SSN2P38931 YKL030WYKL030W 606 nt19.98■□□□□ 0.79
SSN2P38931 SCC4YER147C 1875 nt19.97■□□□□ 0.79
SSN2P38931 YDR094WYDR094W 336 nt19.97■□□□□ 0.79
SSN2P38931 YLR235CYLR235C 399 nt19.97■□□□□ 0.79
SSN2P38931 FMP52YER004W 696 nt19.88■□□□□ 0.77
SSN2P38931 YBR220CYBR220C 1683 nt19.88■□□□□ 0.77
SSN2P38931 DIC1YLR348C 897 nt19.83■□□□□ 0.76
SSN2P38931 YFL015W-AYFL015W-A 318 nt19.75■□□□□ 0.75
SSN2P38931 TIM23YNR017W 669 nt19.75■□□□□ 0.75
SSN2P38931 SNF6YHL025W 999 nt19.74■□□□□ 0.75
SSN2P38931 PCM1YEL058W 1674 nt19.73■□□□□ 0.75
SSN2P38931 YLR179CYLR179C 606 nt19.66■□□□□ 0.74
SSN2P38931 PRE6YOL038W 765 nt19.65■□□□□ 0.74
SSN2P38931 RRT12YCR045C 1476 nt19.64■□□□□ 0.73
SSN2P38931 PAU16YKL224C 372 nt19.62■□□□□ 0.73
SSN2P38931 YSC84YHR016C 1407 nt19.57■□□□□ 0.72
SSN2P38931 tL(GAG)GtL(GAG)G 82 nt19.53■□□□□ 0.72
SSN2P38931 YNL195CYNL195C 786 nt19.51■□□□□ 0.71
SSN2P38931 YIH1YCR059C 777 nt19.49■□□□□ 0.71
SSN2P38931 WSC2YNL283C 1512 nt19.47■□□□□ 0.71
SSN2P38931 RNQ1YCL028W 1218 nt19.44■□□□□ 0.7
SSN2P38931 BIO4YNR057C 714 nt19.43■□□□□ 0.7
SSN2P38931 YHL050CYHL050C 2094 nt19.41■□□□□ 0.7
SSN2P38931 YLL053CYLL053C 459 nt19.39■□□□□ 0.69
SSN2P38931 YPR064WYPR064W 420 nt19.39■□□□□ 0.69
SSN2P38931 YFR018CYFR018C 1092 nt19.37■□□□□ 0.69
SSN2P38931 SIM1YIL123W 1431 nt19.33■□□□□ 0.68
SSN2P38931 SBA1YKL117W 651 nt19.29■□□□□ 0.68
SSN2P38931 TAD3YLR316C 969 nt19.29■□□□□ 0.68
SSN2P38931 YFL066CYFL066C 1179 nt19.25■□□□□ 0.67
SSN2P38931 AHT1YHR093W 549 nt19.25■□□□□ 0.67
SSN2P38931 FTR1YER145C 1215 nt19.24■□□□□ 0.67
SSN2P38931 TRM5YHR070W 1500 nt19.21■□□□□ 0.67
SSN2P38931 RRT5YFR032C 870 nt19.21■□□□□ 0.67
SSN2P38931 GAL1YBR020W 1587 nt19.21■□□□□ 0.67
SSN2P38931 PEX25YPL112C 1185 nt19.14■□□□□ 0.65
SSN2P38931 ATF2YGR177C 1608 nt19.1■□□□□ 0.65
SSN2P38931 BDH1YAL060W 1149 nt19.07■□□□□ 0.64
SSN2P38931 YNL115CYNL115C 1935 nt19.04■□□□□ 0.64
SSN2P38931 BDF1YLR399C 2061 nt19.03■□□□□ 0.64
SSN2P38931 YDR524C-BYDR524C-B 201 nt19.02■□□□□ 0.64
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms