Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 PHO4YFR034C 939 nt12.82□□□□□ -0.36
PEX28P38848 CCT6YDR188W 1641 nt12.78□□□□□ -0.36
PEX28P38848 ADO1YJR105W 1023 nt12.74□□□□□ -0.37
PEX28P38848 SUF2tP(AGG)C 72 nt12.66□□□□□ -0.38
PEX28P38848 SUF10tP(AGG)N 72 nt12.66□□□□□ -0.38
PEX28P38848 YEL076C-AYEL076C-A 651 nt12.65□□□□□ -0.38
PEX28P38848 YEL076CYEL076C 651 nt12.65□□□□□ -0.38
PEX28P38848 YLR464WYLR464W 651 nt12.65□□□□□ -0.38
PEX28P38848 ERV46YAL042W 1248 nt12.63□□□□□ -0.39
PEX28P38848 LPX1YOR084W 1164 nt12.63□□□□□ -0.39
PEX28P38848 UBX6YJL048C 1191 nt12.59□□□□□ -0.39
PEX28P38848 ALF1YNL148C 765 nt12.59□□□□□ -0.39
PEX28P38848 YJL152WYJL152W 360 nt12.58□□□□□ -0.4
PEX28P38848 IDH1YNL037C 1083 nt12.57□□□□□ -0.4
PEX28P38848 SPP1YPL138C 1062 nt12.56□□□□□ -0.4
PEX28P38848 RTG1YOL067C 534 nt12.54□□□□□ -0.4
PEX28P38848 SIS1YNL007C 1059 nt12.51□□□□□ -0.41
PEX28P38848 YDR433WYDR433W 441 nt12.48□□□□□ -0.41
PEX28P38848 YKR040CYKR040C 504 nt12.46□□□□□ -0.41
PEX28P38848 YDR095CYDR095C 411 nt12.4□□□□□ -0.42
PEX28P38848 YPS1YLR120C 1710 nt12.38□□□□□ -0.43
PEX28P38848 GBP2YCL011C 1284 nt12.36□□□□□ -0.43
PEX28P38848 HUA1YGR268C 597 nt12.34□□□□□ -0.43
PEX28P38848 TIR4YOR009W 1464 nt12.32□□□□□ -0.44
PEX28P38848 YDR094WYDR094W 336 nt12.31□□□□□ -0.44
PEX28P38848 MXR2YCL033C 507 nt12.3□□□□□ -0.44
PEX28P38848 YHR165W-AYHR165W-A 312 nt12.22□□□□□ -0.45
PEX28P38848 CAC2YML102W 1407 nt12.2□□□□□ -0.46
PEX28P38848 YFL015W-AYFL015W-A 318 nt12.2□□□□□ -0.46
PEX28P38848 RPP2AYOL039W 321 nt12.17□□□□□ -0.46
PEX28P38848 YCL048W-AYCL048W-A 240 nt12.17□□□□□ -0.46
PEX28P38848 TCD2YKL027W 1344 nt12.16□□□□□ -0.46
PEX28P38848 PET9YBL030C 957 nt12.12□□□□□ -0.47
PEX28P38848 ART5YGR068C 1761 nt12.1□□□□□ -0.47
PEX28P38848 YMR057CYMR057C 372 nt12.1□□□□□ -0.47
PEX28P38848 FRD1YEL047C 1413 nt12.06□□□□□ -0.48
PEX28P38848 PTP1YDL230W 1008 nt12.03□□□□□ -0.48
PEX28P38848 GFD2YCL036W 1701 nt12.01□□□□□ -0.49
PEX28P38848 YKL030WYKL030W 606 nt12.01□□□□□ -0.49
PEX28P38848 DED1YOR204W 1815 nt12□□□□□ -0.49
PEX28P38848 YLR235CYLR235C 399 nt11.99□□□□□ -0.49
PEX28P38848 PTH1YHR189W 573 nt11.98□□□□□ -0.49
PEX28P38848 RRD1YIL153W 1182 nt11.95□□□□□ -0.5
PEX28P38848 YCL042WYCL042W 360 nt11.94□□□□□ -0.5
PEX28P38848 SOR2YDL246C 1074 nt11.91□□□□□ -0.5
PEX28P38848 SOR1YJR159W 1074 nt11.91□□□□□ -0.5
PEX28P38848 MEP2YNL142W 1500 nt11.91□□□□□ -0.5
PEX28P38848 LCB1YMR296C 1677 nt11.88□□□□□ -0.51
PEX28P38848 FPS1YLL043W 2010 nt11.87□□□□□ -0.51
PEX28P38848 NME1NME1 340 nt11.85□□□□□ -0.51
PEX28P38848 SBA1YKL117W 651 nt11.84□□□□□ -0.51
PEX28P38848 PAU16YKL224C 372 nt11.83□□□□□ -0.52
PEX28P38848 FMT1YBL013W 1206 nt11.83□□□□□ -0.52
PEX28P38848 YFR018CYFR018C 1092 nt11.79□□□□□ -0.52
PEX28P38848 RTS2YOR077W 699 nt11.79□□□□□ -0.52
PEX28P38848 RRT5YFR032C 870 nt11.76□□□□□ -0.53
PEX28P38848 tL(GAG)GtL(GAG)G 82 nt11.76□□□□□ -0.53
PEX28P38848 FMP52YER004W 696 nt11.75□□□□□ -0.53
PEX28P38848 DCW1YKL046C 1350 nt11.71□□□□□ -0.53
PEX28P38848 CUE1YMR264W 612 nt11.71□□□□□ -0.53
PEX28P38848 SPT5YML010W 3192 nt11.7□□□□□ -0.54
PEX28P38848 TIM23YNR017W 669 nt11.69□□□□□ -0.54
PEX28P38848 CWP1YKL096W 720 nt11.68□□□□□ -0.54
PEX28P38848 PRE6YOL038W 765 nt11.66□□□□□ -0.54
PEX28P38848 IRC15YPL017C 1500 nt11.65□□□□□ -0.55
PEX28P38848 DIC1YLR348C 897 nt11.62□□□□□ -0.55
PEX28P38848 ADH2YMR303C 1047 nt11.62□□□□□ -0.55
PEX28P38848 EMI2YDR516C 1503 nt11.61□□□□□ -0.55
PEX28P38848 YPR064WYPR064W 420 nt11.6□□□□□ -0.55
PEX28P38848 YDL221WYDL221W 552 nt11.59□□□□□ -0.55
PEX28P38848 YLR179CYLR179C 606 nt11.59□□□□□ -0.55
PEX28P38848 YIL100WYIL100W 354 nt11.58□□□□□ -0.56
PEX28P38848 SNF6YHL025W 999 nt11.57□□□□□ -0.56
PEX28P38848 TAD3YLR316C 969 nt11.54□□□□□ -0.56
PEX28P38848 GIS3YLR094C 1509 nt11.54□□□□□ -0.56
PEX28P38848 YMR090WYMR090W 684 nt11.53□□□□□ -0.56
PEX28P38848 PCM1YEL058W 1674 nt11.48□□□□□ -0.57
PEX28P38848 WSC2YNL283C 1512 nt11.47□□□□□ -0.57
PEX28P38848 AHT1YHR093W 549 nt11.47□□□□□ -0.57
PEX28P38848 RNQ1YCL028W 1218 nt11.47□□□□□ -0.57
PEX28P38848 NAT4YMR069W 858 nt11.46□□□□□ -0.57
PEX28P38848 YGR139WYGR139W 339 nt11.45□□□□□ -0.58
PEX28P38848 PEX25YPL112C 1185 nt11.45□□□□□ -0.58
PEX28P38848 YIH1YCR059C 777 nt11.44□□□□□ -0.58
PEX28P38848 YFL066CYFL066C 1179 nt11.42□□□□□ -0.58
PEX28P38848 GLK1YCL040W 1503 nt11.36□□□□□ -0.59
PEX28P38848 SCC4YER147C 1875 nt11.36□□□□□ -0.59
PEX28P38848 AQY1YPR192W 918 nt11.34□□□□□ -0.59
PEX28P38848 SSA4YER103W 1929 nt11.33□□□□□ -0.6
PEX28P38848 SDH1YKL148C 1923 nt11.33□□□□□ -0.6
PEX28P38848 YSP3YOR003W 1437 nt11.32□□□□□ -0.6
PEX28P38848 YNL115CYNL115C 1935 nt11.31□□□□□ -0.6
PEX28P38848 MSF1YPR047W 1410 nt11.3□□□□□ -0.6
PEX28P38848 BDH1YAL060W 1149 nt11.3□□□□□ -0.6
PEX28P38848 YSC84YHR016C 1407 nt11.28□□□□□ -0.6
PEX28P38848 YLL053CYLL053C 459 nt11.27□□□□□ -0.61
PEX28P38848 YLR415CYLR415C 339 nt11.27□□□□□ -0.61
PEX28P38848 THI74YDR438W 1113 nt11.24□□□□□ -0.61
PEX28P38848 FTR1YER145C 1215 nt11.24□□□□□ -0.61
PEX28P38848 YNL195CYNL195C 786 nt11.24□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 11.1 ms