Protein–RNA interactions for Protein: P38780

YHR054C, Uncharacterized protein YHR054C, yeastyeast

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR054CP38780 SIS1YNL007C 1059 nt13.05□□□□□ -0.32
YHR054CP38780 DSK2YMR276W 1122 nt13.04□□□□□ -0.32
YHR054CP38780 MEP2YNL142W 1500 nt12.99□□□□□ -0.33
YHR054CP38780 IMP2'YIL154C 1041 nt12.99□□□□□ -0.33
YHR054CP38780 YLR236CYLR236C 324 nt12.99□□□□□ -0.33
YHR054CP38780 RPP2AYOL039W 321 nt12.98□□□□□ -0.33
YHR054CP38780 YPR011CYPR011C 981 nt12.98□□□□□ -0.33
YHR054CP38780 FMP45YDL222C 930 nt12.97□□□□□ -0.33
YHR054CP38780 SPT5YML010W 3192 nt12.96□□□□□ -0.33
YHR054CP38780 MOT3YMR070W 1473 nt12.96□□□□□ -0.34
YHR054CP38780 TIR4YOR009W 1464 nt12.92□□□□□ -0.34
YHR054CP38780 YCH1YGR203W 447 nt12.89□□□□□ -0.35
YHR054CP38780 PTP1YDL230W 1008 nt12.88□□□□□ -0.35
YHR054CP38780 IDH1YNL037C 1083 nt12.86□□□□□ -0.35
YHR054CP38780 ART5YGR068C 1761 nt12.84□□□□□ -0.35
YHR054CP38780 DCW1YKL046C 1350 nt12.81□□□□□ -0.36
YHR054CP38780 PET9YBL030C 957 nt12.79□□□□□ -0.36
YHR054CP38780 GFD2YCL036W 1701 nt12.77□□□□□ -0.36
YHR054CP38780 YMR057CYMR057C 372 nt12.77□□□□□ -0.37
YHR054CP38780 LPX1YOR084W 1164 nt12.76□□□□□ -0.37
YHR054CP38780 CAC2YML102W 1407 nt12.76□□□□□ -0.37
YHR054CP38780 YDR433WYDR433W 441 nt12.73□□□□□ -0.37
YHR054CP38780 ERV46YAL042W 1248 nt12.72□□□□□ -0.37
YHR054CP38780 GBP2YCL011C 1284 nt12.72□□□□□ -0.37
YHR054CP38780 YCL048W-AYCL048W-A 240 nt12.71□□□□□ -0.37
YHR054CP38780 EMI2YDR516C 1503 nt12.66□□□□□ -0.38
YHR054CP38780 RTS2YOR077W 699 nt12.64□□□□□ -0.39
YHR054CP38780 YKR040CYKR040C 504 nt12.62□□□□□ -0.39
YHR054CP38780 MXR2YCL033C 507 nt12.61□□□□□ -0.39
YHR054CP38780 YDL221WYDL221W 552 nt12.58□□□□□ -0.4
YHR054CP38780 SPP1YPL138C 1062 nt12.58□□□□□ -0.4
YHR054CP38780 YMR090WYMR090W 684 nt12.56□□□□□ -0.4
YHR054CP38780 TCD2YKL027W 1344 nt12.56□□□□□ -0.4
YHR054CP38780 IRC15YPL017C 1500 nt12.55□□□□□ -0.4
YHR054CP38780 FPS1YLL043W 2010 nt12.54□□□□□ -0.4
YHR054CP38780 MRPL8YJL063C 717 nt12.48□□□□□ -0.41
YHR054CP38780 CUE1YMR264W 612 nt12.48□□□□□ -0.41
YHR054CP38780 GIS3YLR094C 1509 nt12.47□□□□□ -0.41
YHR054CP38780 SSA4YER103W 1929 nt12.47□□□□□ -0.41
YHR054CP38780 RRD1YIL153W 1182 nt12.44□□□□□ -0.42
YHR054CP38780 DED1YOR204W 1815 nt12.43□□□□□ -0.42
YHR054CP38780 Q0182Q0182 405 nt12.41□□□□□ -0.42
YHR054CP38780 YEL076C-AYEL076C-A 651 nt12.37□□□□□ -0.43
YHR054CP38780 YEL076CYEL076C 651 nt12.37□□□□□ -0.43
YHR054CP38780 YLR464WYLR464W 651 nt12.37□□□□□ -0.43
YHR054CP38780 RTG1YOL067C 534 nt12.37□□□□□ -0.43
YHR054CP38780 SDH1YKL148C 1923 nt12.37□□□□□ -0.43
YHR054CP38780 YIL100WYIL100W 354 nt12.36□□□□□ -0.43
YHR054CP38780 ADO1YJR105W 1023 nt12.35□□□□□ -0.43
YHR054CP38780 SCC4YER147C 1875 nt12.35□□□□□ -0.43
YHR054CP38780 FRD1YEL047C 1413 nt12.35□□□□□ -0.43
YHR054CP38780 YCL042WYCL042W 360 nt12.32□□□□□ -0.44
YHR054CP38780 YBR220CYBR220C 1683 nt12.32□□□□□ -0.44
YHR054CP38780 FMT1YBL013W 1206 nt12.31□□□□□ -0.44
YHR054CP38780 SOR2YDL246C 1074 nt12.26□□□□□ -0.45
YHR054CP38780 SOR1YJR159W 1074 nt12.26□□□□□ -0.45
YHR054CP38780 FMP52YER004W 696 nt12.24□□□□□ -0.45
YHR054CP38780 PTH1YHR189W 573 nt12.23□□□□□ -0.45
YHR054CP38780 CWP1YKL096W 720 nt12.21□□□□□ -0.45
YHR054CP38780 HUA1YGR268C 597 nt12.18□□□□□ -0.46
YHR054CP38780 ADH2YMR303C 1047 nt12.16□□□□□ -0.46
YHR054CP38780 YLR235CYLR235C 399 nt12.15□□□□□ -0.46
YHR054CP38780 YNL195CYNL195C 786 nt12.13□□□□□ -0.47
YHR054CP38780 YKL030WYKL030W 606 nt12.12□□□□□ -0.47
YHR054CP38780 PCM1YEL058W 1674 nt12.08□□□□□ -0.48
YHR054CP38780 SNF6YHL025W 999 nt12.07□□□□□ -0.48
YHR054CP38780 UBX6YJL048C 1191 nt12.05□□□□□ -0.48
YHR054CP38780 LCB1YMR296C 1677 nt12.05□□□□□ -0.48
YHR054CP38780 RRT12YCR045C 1476 nt12.03□□□□□ -0.48
YHR054CP38780 YSC84YHR016C 1407 nt12.02□□□□□ -0.49
YHR054CP38780 DIC1YLR348C 897 nt12.01□□□□□ -0.49
YHR054CP38780 TIM23YNR017W 669 nt11.97□□□□□ -0.49
YHR054CP38780 YIH1YCR059C 777 nt11.93□□□□□ -0.5
YHR054CP38780 RNQ1YCL028W 1218 nt11.93□□□□□ -0.5
YHR054CP38780 YHL050CYHL050C 2094 nt11.93□□□□□ -0.5
YHR054CP38780 YDR094WYDR094W 336 nt11.91□□□□□ -0.5
YHR054CP38780 YLR179CYLR179C 606 nt11.91□□□□□ -0.5
YHR054CP38780 BDF1YLR399C 2061 nt11.89□□□□□ -0.51
YHR054CP38780 SIM1YIL123W 1431 nt11.86□□□□□ -0.51
YHR054CP38780 SEC11YIR022W 504 nt11.85□□□□□ -0.51
YHR054CP38780 BIO4YNR057C 714 nt11.84□□□□□ -0.51
YHR054CP38780 tL(GAG)GtL(GAG)G 82 nt11.82□□□□□ -0.52
YHR054CP38780 YLL053CYLL053C 459 nt11.82□□□□□ -0.52
YHR054CP38780 YPR064WYPR064W 420 nt11.82□□□□□ -0.52
YHR054CP38780 TAT1YBR069C 1860 nt11.76□□□□□ -0.53
YHR054CP38780 WSC2YNL283C 1512 nt11.76□□□□□ -0.53
YHR054CP38780 FTR1YER145C 1215 nt11.75□□□□□ -0.53
YHR054CP38780 AHT1YHR093W 549 nt11.74□□□□□ -0.53
YHR054CP38780 TAD3YLR316C 969 nt11.74□□□□□ -0.53
YHR054CP38780 PCH2YBR186W 1695 nt11.73□□□□□ -0.53
YHR054CP38780 AQY1YPR192W 918 nt11.72□□□□□ -0.53
YHR054CP38780 GAL1YBR020W 1587 nt11.71□□□□□ -0.53
YHR054CP38780 TRM5YHR070W 1500 nt11.69□□□□□ -0.54
YHR054CP38780 YFR018CYFR018C 1092 nt11.66□□□□□ -0.54
YHR054CP38780 YFL015W-AYFL015W-A 318 nt11.64□□□□□ -0.55
YHR054CP38780 ERF2YLR246W 1080 nt11.64□□□□□ -0.55
YHR054CP38780 GUT2YIL155C 1950 nt11.64□□□□□ -0.55
YHR054CP38780 ATF2YGR177C 1608 nt11.62□□□□□ -0.55
YHR054CP38780 PAU16YKL224C 372 nt11.62□□□□□ -0.55
YHR054CP38780 STB1YNL309W 1263 nt11.62□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 6.6 ms