Protein–RNA interactions for Protein: P38759

VPS29, Vacuolar protein sorting-associated protein 29, yeastyeast

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS29P38759 FPR4YLR449W 1179 nt14.17□□□□□ -0.14
VPS29P38759 YBL100CYBL100C 315 nt14.14□□□□□ -0.15
VPS29P38759 WHI5YOR083W 888 nt14.14□□□□□ -0.15
VPS29P38759 SRN2YLR119W 642 nt14.13□□□□□ -0.15
VPS29P38759 DAL1YIR027C 1383 nt14.11□□□□□ -0.15
VPS29P38759 BSC6YOL137W 1494 nt14.06□□□□□ -0.16
VPS29P38759 TRM9YML014W 840 nt14.05□□□□□ -0.16
VPS29P38759 ARA2YMR041C 1008 nt14.05□□□□□ -0.16
VPS29P38759 FIS1YIL065C 468 nt14.04□□□□□ -0.16
VPS29P38759 FUN26YAL022C 1554 nt13.99□□□□□ -0.17
VPS29P38759 PHO4YFR034C 939 nt13.98□□□□□ -0.17
VPS29P38759 YPR011CYPR011C 981 nt13.89□□□□□ -0.19
VPS29P38759 FMP45YDL222C 930 nt13.88□□□□□ -0.19
VPS29P38759 DSK2YMR276W 1122 nt13.87□□□□□ -0.19
VPS29P38759 YEL009C-AYEL009C-A 408 nt13.85□□□□□ -0.19
VPS29P38759 CCT6YDR188W 1641 nt13.84□□□□□ -0.19
VPS29P38759 YLR154C-GYLR154C-G 150 nt13.84□□□□□ -0.19
VPS29P38759 YLR122CYLR122C 378 nt13.82□□□□□ -0.2
VPS29P38759 YLR236CYLR236C 324 nt13.82□□□□□ -0.2
VPS29P38759 IMP2'YIL154C 1041 nt13.77□□□□□ -0.21
VPS29P38759 ARP10YDR106W 855 nt13.76□□□□□ -0.21
VPS29P38759 YCH1YGR203W 447 nt13.74□□□□□ -0.21
VPS29P38759 YCR099CYCR099C 468 nt13.72□□□□□ -0.21
VPS29P38759 ALF1YNL148C 765 nt13.71□□□□□ -0.21
VPS29P38759 SUF2tP(AGG)C 72 nt13.69□□□□□ -0.22
VPS29P38759 SUF10tP(AGG)N 72 nt13.69□□□□□ -0.22
VPS29P38759 Q0142Q0142 177 nt13.68□□□□□ -0.22
VPS29P38759 YJL152WYJL152W 360 nt13.68□□□□□ -0.22
VPS29P38759 ABZ2YMR289W 1125 nt13.68□□□□□ -0.22
VPS29P38759 AI3Q0060 1248 nt13.67□□□□□ -0.22
VPS29P38759 MET8YBR213W 825 nt13.6□□□□□ -0.23
VPS29P38759 MRPL8YJL063C 717 nt13.58□□□□□ -0.24
VPS29P38759 LPX1YOR084W 1164 nt13.58□□□□□ -0.24
VPS29P38759 YPS1YLR120C 1710 nt13.56□□□□□ -0.24
VPS29P38759 TOM20YGR082W 552 nt13.53□□□□□ -0.24
VPS29P38759 YDR095CYDR095C 411 nt13.52□□□□□ -0.25
VPS29P38759 PET20YPL159C 762 nt13.52□□□□□ -0.25
VPS29P38759 CLB6YGR109C 1143 nt13.51□□□□□ -0.25
VPS29P38759 IDH1YNL037C 1083 nt13.51□□□□□ -0.25
VPS29P38759 SPP1YPL138C 1062 nt13.51□□□□□ -0.25
VPS29P38759 UTP6YDR449C 1323 nt13.49□□□□□ -0.25
VPS29P38759 ERV46YAL042W 1248 nt13.49□□□□□ -0.25
VPS29P38759 YDR433WYDR433W 441 nt13.47□□□□□ -0.25
VPS29P38759 Q0017Q0017 162 nt13.47□□□□□ -0.25
VPS29P38759 SIS1YNL007C 1059 nt13.46□□□□□ -0.25
VPS29P38759 YHR165W-AYHR165W-A 312 nt13.42□□□□□ -0.26
VPS29P38759 ADO1YJR105W 1023 nt13.41□□□□□ -0.26
VPS29P38759 TIR4YOR009W 1464 nt13.41□□□□□ -0.26
VPS29P38759 YEL076C-AYEL076C-A 651 nt13.39□□□□□ -0.27
VPS29P38759 YEL076CYEL076C 651 nt13.39□□□□□ -0.27
VPS29P38759 YLR464WYLR464W 651 nt13.39□□□□□ -0.27
VPS29P38759 Q0255Q0255 1419 nt13.38□□□□□ -0.27
VPS29P38759 YKR040CYKR040C 504 nt13.37□□□□□ -0.27
VPS29P38759 SKG1YKR100C 1068 nt13.36□□□□□ -0.27
VPS29P38759 GBP2YCL011C 1284 nt13.36□□□□□ -0.27
VPS29P38759 snR78snR78 87 nt13.35□□□□□ -0.27
VPS29P38759 AI5_BETAQ0075 1065 nt13.35□□□□□ -0.27
VPS29P38759 RTG1YOL067C 534 nt13.34□□□□□ -0.27
VPS29P38759 LCP5YER127W 1074 nt13.33□□□□□ -0.28
VPS29P38759 MXR2YCL033C 507 nt13.33□□□□□ -0.28
VPS29P38759 UBX6YJL048C 1191 nt13.3□□□□□ -0.28
VPS29P38759 RPP2AYOL039W 321 nt13.29□□□□□ -0.28
VPS29P38759 HMT1YBR034C 1047 nt13.29□□□□□ -0.28
VPS29P38759 URH1YDR400W 1023 nt13.28□□□□□ -0.28
VPS29P38759 ART5YGR068C 1761 nt13.26□□□□□ -0.29
VPS29P38759 YMR057CYMR057C 372 nt13.25□□□□□ -0.29
VPS29P38759 YOR169CYOR169C 465 nt13.25□□□□□ -0.29
VPS29P38759 CAC2YML102W 1407 nt13.24□□□□□ -0.29
VPS29P38759 YNR068CYNR068C 819 nt13.22□□□□□ -0.29
VPS29P38759 YCL048W-AYCL048W-A 240 nt13.21□□□□□ -0.29
VPS29P38759 PTP1YDL230W 1008 nt13.19□□□□□ -0.3
VPS29P38759 YGL188CYGL188C 174 nt13.19□□□□□ -0.3
VPS29P38759 PET9YBL030C 957 nt13.18□□□□□ -0.3
VPS29P38759 YPL071CYPL071C 471 nt13.16□□□□□ -0.3
VPS29P38759 YPL168WYPL168W 1293 nt13.16□□□□□ -0.3
VPS29P38759 TCD2YKL027W 1344 nt13.13□□□□□ -0.31
VPS29P38759 GFD2YCL036W 1701 nt13.13□□□□□ -0.31
VPS29P38759 MEP2YNL142W 1500 nt13.13□□□□□ -0.31
VPS29P38759 HUA1YGR268C 597 nt13.11□□□□□ -0.31
VPS29P38759 ATP6Q0085 780 nt13.1□□□□□ -0.31
VPS29P38759 AIR1YIL079C 1083 nt13.06□□□□□ -0.32
VPS29P38759 DED1YOR204W 1815 nt13.02□□□□□ -0.32
VPS29P38759 SPT5YML010W 3192 nt13.01□□□□□ -0.33
VPS29P38759 FRD1YEL047C 1413 nt13.01□□□□□ -0.33
VPS29P38759 DCW1YKL046C 1350 nt12.98□□□□□ -0.33
VPS29P38759 YDR094WYDR094W 336 nt12.98□□□□□ -0.33
VPS29P38759 RRD1YIL153W 1182 nt12.97□□□□□ -0.33
VPS29P38759 PTH1YHR189W 573 nt12.96□□□□□ -0.33
VPS29P38759 RTS2YOR077W 699 nt12.96□□□□□ -0.33
VPS29P38759 FPS1YLL043W 2010 nt12.96□□□□□ -0.34
VPS29P38759 YHM2YMR241W 945 nt12.95□□□□□ -0.34
VPS29P38759 URE2YNL229C 1065 nt12.95□□□□□ -0.34
VPS29P38759 YJL118WYJL118W 660 nt12.92□□□□□ -0.34
VPS29P38759 YNL067W-AYNL067W-A 147 nt12.91□□□□□ -0.34
VPS29P38759 YCL042WYCL042W 360 nt12.91□□□□□ -0.34
VPS29P38759 FMT1YBL013W 1206 nt12.87□□□□□ -0.35
VPS29P38759 YKL030WYKL030W 606 nt12.86□□□□□ -0.35
VPS29P38759 KTR3YBR205W 1215 nt12.86□□□□□ -0.35
VPS29P38759 YLR235CYLR235C 399 nt12.84□□□□□ -0.35
VPS29P38759 YFL015W-AYFL015W-A 318 nt12.83□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 44.6 ms