Protein–RNA interactions for Protein: P38753

HSE1, Class E vacuolar protein-sorting machinery protein HSE1, yeastyeast

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HSE1P38753 YLR154C-GYLR154C-G 150 nt12.05□□□□□ -0.48
HSE1P38753 tM(CAU)CtM(CAU)C 72 nt12.03□□□□□ -0.48
HSE1P38753 IMT4tM(CAU)E 72 nt12.03□□□□□ -0.48
HSE1P38753 IMT3tM(CAU)J3 72 nt12.03□□□□□ -0.48
HSE1P38753 IMT1tM(CAU)O1 72 nt12.03□□□□□ -0.48
HSE1P38753 IMT2tM(CAU)P 72 nt12.03□□□□□ -0.48
HSE1P38753 PTP1YDL230W 1008 nt12.02□□□□□ -0.49
HSE1P38753 PUS2YGL063W 1113 nt12.01□□□□□ -0.49
HSE1P38753 YJL152WYJL152W 360 nt12.01□□□□□ -0.49
HSE1P38753 ART5YGR068C 1761 nt11.97□□□□□ -0.49
HSE1P38753 CAC2YML102W 1407 nt11.95□□□□□ -0.5
HSE1P38753 SSA4YER103W 1929 nt11.95□□□□□ -0.5
HSE1P38753 TIR4YOR009W 1464 nt11.95□□□□□ -0.5
HSE1P38753 EMI2YDR516C 1503 nt11.92□□□□□ -0.5
HSE1P38753 GFD2YCL036W 1701 nt11.89□□□□□ -0.51
HSE1P38753 PET9YBL030C 957 nt11.86□□□□□ -0.51
HSE1P38753 YCH1YGR203W 447 nt11.85□□□□□ -0.51
HSE1P38753 YMR090WYMR090W 684 nt11.85□□□□□ -0.51
HSE1P38753 YMR057CYMR057C 372 nt11.84□□□□□ -0.51
HSE1P38753 YDL221WYDL221W 552 nt11.83□□□□□ -0.52
HSE1P38753 DSK2YMR276W 1122 nt11.82□□□□□ -0.52
HSE1P38753 RTS2YOR077W 699 nt11.81□□□□□ -0.52
HSE1P38753 IMP2'YIL154C 1041 nt11.77□□□□□ -0.53
HSE1P38753 YLR236CYLR236C 324 nt11.77□□□□□ -0.53
HSE1P38753 IDH1YNL037C 1083 nt11.76□□□□□ -0.53
HSE1P38753 IRC15YPL017C 1500 nt11.76□□□□□ -0.53
HSE1P38753 YPR011CYPR011C 981 nt11.75□□□□□ -0.53
HSE1P38753 YCL048W-AYCL048W-A 240 nt11.75□□□□□ -0.53
HSE1P38753 FMP45YDL222C 930 nt11.71□□□□□ -0.53
HSE1P38753 GIS3YLR094C 1509 nt11.7□□□□□ -0.54
HSE1P38753 SDH1YKL148C 1923 nt11.67□□□□□ -0.54
HSE1P38753 GBP2YCL011C 1284 nt11.67□□□□□ -0.54
HSE1P38753 YBR220CYBR220C 1683 nt11.66□□□□□ -0.54
HSE1P38753 YDR433WYDR433W 441 nt11.64□□□□□ -0.55
HSE1P38753 CUE1YMR264W 612 nt11.63□□□□□ -0.55
HSE1P38753 SCC4YER147C 1875 nt11.63□□□□□ -0.55
HSE1P38753 LPX1YOR084W 1164 nt11.59□□□□□ -0.55
HSE1P38753 NVJ2YPR091C 2313 nt11.57□□□□□ -0.56
HSE1P38753 YIL100WYIL100W 354 nt11.53□□□□□ -0.56
HSE1P38753 MXR2YCL033C 507 nt11.53□□□□□ -0.56
HSE1P38753 TCD2YKL027W 1344 nt11.53□□□□□ -0.56
HSE1P38753 ERV46YAL042W 1248 nt11.52□□□□□ -0.57
HSE1P38753 BDF1YLR399C 2061 nt11.51□□□□□ -0.57
HSE1P38753 RPM1RPM1 483 nt11.48□□□□□ -0.57
HSE1P38753 RRD1YIL153W 1182 nt11.46□□□□□ -0.57
HSE1P38753 YKR040CYKR040C 504 nt11.46□□□□□ -0.57
HSE1P38753 NME1NME1 340 nt11.46□□□□□ -0.57
HSE1P38753 DED1YOR204W 1815 nt11.44□□□□□ -0.58
HSE1P38753 YNL195CYNL195C 786 nt11.38□□□□□ -0.59
HSE1P38753 TAT1YBR069C 1860 nt11.38□□□□□ -0.59
HSE1P38753 SPP1YPL138C 1062 nt11.37□□□□□ -0.59
HSE1P38753 PAC11YDR488C 1602 nt11.35□□□□□ -0.59
HSE1P38753 YSC84YHR016C 1407 nt11.35□□□□□ -0.59
HSE1P38753 RRT12YCR045C 1476 nt11.33□□□□□ -0.6
HSE1P38753 YGR139WYGR139W 339 nt11.33□□□□□ -0.6
HSE1P38753 FMT1YBL013W 1206 nt11.33□□□□□ -0.6
HSE1P38753 YCL042WYCL042W 360 nt11.32□□□□□ -0.6
HSE1P38753 FRD1YEL047C 1413 nt11.28□□□□□ -0.6
HSE1P38753 FMP52YER004W 696 nt11.28□□□□□ -0.6
HSE1P38753 CWP1YKL096W 720 nt11.27□□□□□ -0.61
HSE1P38753 YHL050CYHL050C 2094 nt11.26□□□□□ -0.61
HSE1P38753 SEC11YIR022W 504 nt11.25□□□□□ -0.61
HSE1P38753 SOR2YDL246C 1074 nt11.23□□□□□ -0.61
HSE1P38753 SOR1YJR159W 1074 nt11.23□□□□□ -0.61
HSE1P38753 ADH2YMR303C 1047 nt11.22□□□□□ -0.61
HSE1P38753 PCM1YEL058W 1674 nt11.2□□□□□ -0.62
HSE1P38753 SNF6YHL025W 999 nt11.16□□□□□ -0.62
HSE1P38753 PTH1YHR189W 573 nt11.16□□□□□ -0.62
HSE1P38753 PCH2YBR186W 1695 nt11.16□□□□□ -0.62
HSE1P38753 FRE6YLL051C 2139 nt11.15□□□□□ -0.62
HSE1P38753 YJL225CYJL225C 5277 nt11.14□□□□□ -0.63
HSE1P38753 GUT2YIL155C 1950 nt11.1□□□□□ -0.63
HSE1P38753 RTG1YOL067C 534 nt11.08□□□□□ -0.64
HSE1P38753 YLR235CYLR235C 399 nt11.06□□□□□ -0.64
HSE1P38753 SIM1YIL123W 1431 nt11.05□□□□□ -0.64
HSE1P38753 YEL076C-AYEL076C-A 651 nt11.04□□□□□ -0.64
HSE1P38753 YEL076CYEL076C 651 nt11.04□□□□□ -0.64
HSE1P38753 MRPL8YJL063C 717 nt11.04□□□□□ -0.64
HSE1P38753 YLR464WYLR464W 651 nt11.04□□□□□ -0.64
HSE1P38753 DIC1YLR348C 897 nt11.03□□□□□ -0.64
HSE1P38753 RDN37-1RDN37-1 5354 nt11.02□□□□□ -0.65
HSE1P38753 RDN37-2RDN37-2 5354 nt11.02□□□□□ -0.65
HSE1P38753 LCB1YMR296C 1677 nt11.01□□□□□ -0.65
HSE1P38753 YKL030WYKL030W 606 nt11□□□□□ -0.65
HSE1P38753 BIO4YNR057C 714 nt11□□□□□ -0.65
HSE1P38753 RNQ1YCL028W 1218 nt10.99□□□□□ -0.65
HSE1P38753 YIH1YCR059C 777 nt10.98□□□□□ -0.65
HSE1P38753 ADO1YJR105W 1023 nt10.98□□□□□ -0.65
HSE1P38753 PIB2YGL023C 1908 nt10.97□□□□□ -0.65
HSE1P38753 NCP1YHR042W 2076 nt10.97□□□□□ -0.65
HSE1P38753 HUA1YGR268C 597 nt10.94□□□□□ -0.66
HSE1P38753 TIM23YNR017W 669 nt10.94□□□□□ -0.66
HSE1P38753 RTF1YGL244W 1677 nt10.94□□□□□ -0.66
HSE1P38753 YLL053CYLL053C 459 nt10.93□□□□□ -0.66
HSE1P38753 BOP3YNL042W 1191 nt10.93□□□□□ -0.66
HSE1P38753 YLR179CYLR179C 606 nt10.91□□□□□ -0.66
HSE1P38753 FTR1YER145C 1215 nt10.84□□□□□ -0.67
HSE1P38753 GAL1YBR020W 1587 nt10.82□□□□□ -0.68
HSE1P38753 TRM5YHR070W 1500 nt10.81□□□□□ -0.68
HSE1P38753 ERF2YLR246W 1080 nt10.81□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms