Protein–RNA interactions for Protein: P38711

RPS27B, 40S ribosomal protein S27-B, yeastyeast

Predictions only

Length 82 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS27BP38711 SIS1YNL007C 1059 nt11.42□□□□□ -0.58
RPS27BP38711 DSK2YMR276W 1122 nt11.39□□□□□ -0.59
RPS27BP38711 YPR011CYPR011C 981 nt11.37□□□□□ -0.59
RPS27BP38711 YLR236CYLR236C 324 nt11.36□□□□□ -0.59
RPS27BP38711 IMP2'YIL154C 1041 nt11.35□□□□□ -0.59
RPS27BP38711 YJL152WYJL152W 360 nt11.35□□□□□ -0.59
RPS27BP38711 MEP2YNL142W 1500 nt11.35□□□□□ -0.59
RPS27BP38711 RPP2AYOL039W 321 nt11.33□□□□□ -0.6
RPS27BP38711 FMP45YDL222C 930 nt11.32□□□□□ -0.6
RPS27BP38711 MOT3YMR070W 1473 nt11.32□□□□□ -0.6
RPS27BP38711 TIR4YOR009W 1464 nt11.3□□□□□ -0.6
RPS27BP38711 YCH1YGR203W 447 nt11.29□□□□□ -0.6
RPS27BP38711 PTP1YDL230W 1008 nt11.28□□□□□ -0.6
RPS27BP38711 ART5YGR068C 1761 nt11.23□□□□□ -0.61
RPS27BP38711 DCW1YKL046C 1350 nt11.2□□□□□ -0.62
RPS27BP38711 IDH1YNL037C 1083 nt11.2□□□□□ -0.62
RPS27BP38711 PET9YBL030C 957 nt11.17□□□□□ -0.62
RPS27BP38711 GFD2YCL036W 1701 nt11.17□□□□□ -0.62
RPS27BP38711 CAC2YML102W 1407 nt11.16□□□□□ -0.62
RPS27BP38711 YMR057CYMR057C 372 nt11.15□□□□□ -0.62
RPS27BP38711 LPX1YOR084W 1164 nt11.15□□□□□ -0.62
RPS27BP38711 ERV46YAL042W 1248 nt11.13□□□□□ -0.63
RPS27BP38711 YDR433WYDR433W 441 nt11.1□□□□□ -0.63
RPS27BP38711 GBP2YCL011C 1284 nt11.09□□□□□ -0.63
RPS27BP38711 YCL048W-AYCL048W-A 240 nt11.06□□□□□ -0.64
RPS27BP38711 EMI2YDR516C 1503 nt11.05□□□□□ -0.64
RPS27BP38711 YKR040CYKR040C 504 nt11.02□□□□□ -0.65
RPS27BP38711 RTS2YOR077W 699 nt11.01□□□□□ -0.65
RPS27BP38711 SPP1YPL138C 1062 nt11.01□□□□□ -0.65
RPS27BP38711 MXR2YCL033C 507 nt11.01□□□□□ -0.65
RPS27BP38711 YDL221WYDL221W 552 nt10.99□□□□□ -0.65
RPS27BP38711 IRC15YPL017C 1500 nt10.99□□□□□ -0.65
RPS27BP38711 FPS1YLL043W 2010 nt10.98□□□□□ -0.65
RPS27BP38711 TCD2YKL027W 1344 nt10.95□□□□□ -0.66
RPS27BP38711 YMR090WYMR090W 684 nt10.94□□□□□ -0.66
RPS27BP38711 SSA4YER103W 1929 nt10.92□□□□□ -0.66
RPS27BP38711 MRPL8YJL063C 717 nt10.92□□□□□ -0.66
RPS27BP38711 DED1YOR204W 1815 nt10.91□□□□□ -0.66
RPS27BP38711 CUE1YMR264W 612 nt10.9□□□□□ -0.66
RPS27BP38711 GIS3YLR094C 1509 nt10.89□□□□□ -0.67
RPS27BP38711 RRD1YIL153W 1182 nt10.88□□□□□ -0.67
RPS27BP38711 RTG1YOL067C 534 nt10.84□□□□□ -0.67
RPS27BP38711 SDH1YKL148C 1923 nt10.83□□□□□ -0.68
RPS27BP38711 YEL076C-AYEL076C-A 651 nt10.82□□□□□ -0.68
RPS27BP38711 YEL076CYEL076C 651 nt10.82□□□□□ -0.68
RPS27BP38711 YLR464WYLR464W 651 nt10.82□□□□□ -0.68
RPS27BP38711 FRD1YEL047C 1413 nt10.81□□□□□ -0.68
RPS27BP38711 ADO1YJR105W 1023 nt10.8□□□□□ -0.68
RPS27BP38711 SCC4YER147C 1875 nt10.79□□□□□ -0.68
RPS27BP38711 YBR220CYBR220C 1683 nt10.79□□□□□ -0.68
RPS27BP38711 FMT1YBL013W 1206 nt10.78□□□□□ -0.68
RPS27BP38711 YIL100WYIL100W 354 nt10.75□□□□□ -0.69
RPS27BP38711 YCL042WYCL042W 360 nt10.74□□□□□ -0.69
RPS27BP38711 SOR2YDL246C 1074 nt10.73□□□□□ -0.69
RPS27BP38711 SOR1YJR159W 1074 nt10.73□□□□□ -0.69
RPS27BP38711 FMP52YER004W 696 nt10.69□□□□□ -0.7
RPS27BP38711 PTH1YHR189W 573 nt10.67□□□□□ -0.7
RPS27BP38711 CWP1YKL096W 720 nt10.64□□□□□ -0.71
RPS27BP38711 HUA1YGR268C 597 nt10.63□□□□□ -0.71
RPS27BP38711 ADH2YMR303C 1047 nt10.63□□□□□ -0.71
RPS27BP38711 YLR235CYLR235C 399 nt10.6□□□□□ -0.71
RPS27BP38711 YKL030WYKL030W 606 nt10.58□□□□□ -0.72
RPS27BP38711 PCM1YEL058W 1674 nt10.56□□□□□ -0.72
RPS27BP38711 UBX6YJL048C 1191 nt10.55□□□□□ -0.72
RPS27BP38711 YNL195CYNL195C 786 nt10.55□□□□□ -0.72
RPS27BP38711 LCB1YMR296C 1677 nt10.53□□□□□ -0.72
RPS27BP38711 RRT12YCR045C 1476 nt10.53□□□□□ -0.72
RPS27BP38711 SNF6YHL025W 999 nt10.52□□□□□ -0.73
RPS27BP38711 YSC84YHR016C 1407 nt10.5□□□□□ -0.73
RPS27BP38711 DIC1YLR348C 897 nt10.49□□□□□ -0.73
RPS27BP38711 BDF1YLR399C 2061 nt10.49□□□□□ -0.73
RPS27BP38711 YHL050CYHL050C 2094 nt10.47□□□□□ -0.73
RPS27BP38711 TIM23YNR017W 669 nt10.46□□□□□ -0.73
RPS27BP38711 YDR094WYDR094W 336 nt10.44□□□□□ -0.74
RPS27BP38711 YIH1YCR059C 777 nt10.42□□□□□ -0.74
RPS27BP38711 RNQ1YCL028W 1218 nt10.42□□□□□ -0.74
RPS27BP38711 YLR179CYLR179C 606 nt10.39□□□□□ -0.75
RPS27BP38711 SEC11YIR022W 504 nt10.35□□□□□ -0.75
RPS27BP38711 BIO4YNR057C 714 nt10.35□□□□□ -0.75
RPS27BP38711 TAT1YBR069C 1860 nt10.34□□□□□ -0.75
RPS27BP38711 SIM1YIL123W 1431 nt10.33□□□□□ -0.76
RPS27BP38711 YLL053CYLL053C 459 nt10.33□□□□□ -0.76
RPS27BP38711 YPR064WYPR064W 420 nt10.32□□□□□ -0.76
RPS27BP38711 tL(GAG)GtL(GAG)G 82 nt10.31□□□□□ -0.76
RPS27BP38711 WSC2YNL283C 1512 nt10.31□□□□□ -0.76
RPS27BP38711 AHT1YHR093W 549 nt10.28□□□□□ -0.76
RPS27BP38711 FTR1YER145C 1215 nt10.27□□□□□ -0.77
RPS27BP38711 TAD3YLR316C 969 nt10.27□□□□□ -0.77
RPS27BP38711 PCH2YBR186W 1695 nt10.26□□□□□ -0.77
RPS27BP38711 GAL1YBR020W 1587 nt10.24□□□□□ -0.77
RPS27BP38711 YFL015W-AYFL015W-A 318 nt10.22□□□□□ -0.77
RPS27BP38711 YFR018CYFR018C 1092 nt10.22□□□□□ -0.77
RPS27BP38711 AQY1YPR192W 918 nt10.22□□□□□ -0.77
RPS27BP38711 TRM5YHR070W 1500 nt10.21□□□□□ -0.78
RPS27BP38711 GUT2YIL155C 1950 nt10.21□□□□□ -0.78
RPS27BP38711 NCP1YHR042W 2076 nt10.21□□□□□ -0.78
RPS27BP38711 ATF2YGR177C 1608 nt10.16□□□□□ -0.78
RPS27BP38711 PRE6YOL038W 765 nt10.16□□□□□ -0.78
RPS27BP38711 PAU16YKL224C 372 nt10.15□□□□□ -0.78
RPS27BP38711 ERF2YLR246W 1080 nt10.15□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms