Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 SCC4YER147C 1875 nt11.95□□□□□ -0.5
TDP1P38319 YGR021WYGR021W 873 nt11.95□□□□□ -0.5
TDP1P38319 SHU1YHL006C 453 nt11.95□□□□□ -0.5
TDP1P38319 MOT3YMR070W 1473 nt11.92□□□□□ -0.5
TDP1P38319 HOM6YJR139C 1080 nt11.92□□□□□ -0.5
TDP1P38319 GIS3YLR094C 1509 nt11.91□□□□□ -0.5
TDP1P38319 GFD2YCL036W 1701 nt11.9□□□□□ -0.5
TDP1P38319 ART5YGR068C 1761 nt11.89□□□□□ -0.51
TDP1P38319 YAL037C-BYAL037C-B 975 nt11.87□□□□□ -0.51
TDP1P38319 PCH2YBR186W 1695 nt11.83□□□□□ -0.52
TDP1P38319 SEC11YIR022W 504 nt11.8□□□□□ -0.52
TDP1P38319 GUT2YIL155C 1950 nt11.79□□□□□ -0.52
TDP1P38319 MNP1YGL068W 585 nt11.79□□□□□ -0.52
TDP1P38319 PET9YBL030C 957 nt11.79□□□□□ -0.52
TDP1P38319 RTS2YOR077W 699 nt11.78□□□□□ -0.52
TDP1P38319 RKM5YLR137W 1104 nt11.74□□□□□ -0.53
TDP1P38319 FPS1YLL043W 2010 nt11.74□□□□□ -0.53
TDP1P38319 TIR4YOR009W 1464 nt11.72□□□□□ -0.53
TDP1P38319 YSC84YHR016C 1407 nt11.71□□□□□ -0.53
TDP1P38319 YCH1YGR203W 447 nt11.71□□□□□ -0.53
TDP1P38319 CUE1YMR264W 612 nt11.69□□□□□ -0.54
TDP1P38319 YHL050CYHL050C 2094 nt11.68□□□□□ -0.54
TDP1P38319 PIB2YGL023C 1908 nt11.67□□□□□ -0.54
TDP1P38319 YMR057CYMR057C 372 nt11.62□□□□□ -0.55
TDP1P38319 RRT12YCR045C 1476 nt11.59□□□□□ -0.55
TDP1P38319 NPL3YDR432W 1245 nt11.58□□□□□ -0.56
TDP1P38319 YOR139CYOR139C 393 nt11.55□□□□□ -0.56
TDP1P38319 RTF1YGL244W 1677 nt11.51□□□□□ -0.57
TDP1P38319 YIL100WYIL100W 354 nt11.5□□□□□ -0.57
TDP1P38319 YNL195CYNL195C 786 nt11.47□□□□□ -0.57
TDP1P38319 YLR154C-GYLR154C-G 150 nt11.46□□□□□ -0.57
TDP1P38319 YLR236CYLR236C 324 nt11.44□□□□□ -0.58
TDP1P38319 BOP3YNL042W 1191 nt11.42□□□□□ -0.58
TDP1P38319 YJL152WYJL152W 360 nt11.41□□□□□ -0.58
TDP1P38319 YOL037CYOL037C 354 nt11.41□□□□□ -0.58
TDP1P38319 PTK1YKL198C 1989 nt11.39□□□□□ -0.59
TDP1P38319 NCP1YHR042W 2076 nt11.37□□□□□ -0.59
TDP1P38319 YCL048W-AYCL048W-A 240 nt11.35□□□□□ -0.59
TDP1P38319 WHI5YOR083W 888 nt11.22□□□□□ -0.61
TDP1P38319 YLR281CYLR281C 468 nt11.2□□□□□ -0.62
TDP1P38319 LCB1YMR296C 1677 nt11.2□□□□□ -0.62
TDP1P38319 RRD1YIL153W 1182 nt11.19□□□□□ -0.62
TDP1P38319 YJL225CYJL225C 5277 nt11.17□□□□□ -0.62
TDP1P38319 DED1YOR204W 1815 nt11.11□□□□□ -0.63
TDP1P38319 IDH1YNL037C 1083 nt11.1□□□□□ -0.63
TDP1P38319 YFL054CYFL054C 1941 nt11.09□□□□□ -0.63
TDP1P38319 UME6YDR207C 2511 nt11.08□□□□□ -0.64
TDP1P38319 FMP52YER004W 696 nt11.08□□□□□ -0.64
TDP1P38319 GBP2YCL011C 1284 nt11.08□□□□□ -0.64
TDP1P38319 tM(CAU)CtM(CAU)C 72 nt11.07□□□□□ -0.64
TDP1P38319 IMT4tM(CAU)E 72 nt11.07□□□□□ -0.64
TDP1P38319 IMT3tM(CAU)J3 72 nt11.07□□□□□ -0.64
TDP1P38319 IMT1tM(CAU)O1 72 nt11.07□□□□□ -0.64
TDP1P38319 IMT2tM(CAU)P 72 nt11.07□□□□□ -0.64
TDP1P38319 SPT8YLR055C 1809 nt11.06□□□□□ -0.64
TDP1P38319 FMT1YBL013W 1206 nt11.04□□□□□ -0.64
TDP1P38319 PCM1YEL058W 1674 nt11.04□□□□□ -0.64
TDP1P38319 TCD2YKL027W 1344 nt11.02□□□□□ -0.65
TDP1P38319 LYS4YDR234W 2082 nt11□□□□□ -0.65
TDP1P38319 SIM1YIL123W 1431 nt10.99□□□□□ -0.65
TDP1P38319 IMP2'YIL154C 1041 nt10.95□□□□□ -0.66
TDP1P38319 PUS2YGL063W 1113 nt10.94□□□□□ -0.66
TDP1P38319 ADH2YMR303C 1047 nt10.94□□□□□ -0.66
TDP1P38319 DSK2YMR276W 1122 nt10.93□□□□□ -0.66
TDP1P38319 BIO4YNR057C 714 nt10.92□□□□□ -0.66
TDP1P38319 CWP1YKL096W 720 nt10.91□□□□□ -0.66
TDP1P38319 YPR011CYPR011C 981 nt10.91□□□□□ -0.66
TDP1P38319 SNF6YHL025W 999 nt10.89□□□□□ -0.67
TDP1P38319 MXR2YCL033C 507 nt10.88□□□□□ -0.67
TDP1P38319 FMP45YDL222C 930 nt10.87□□□□□ -0.67
TDP1P38319 SOR2YDL246C 1074 nt10.87□□□□□ -0.67
TDP1P38319 SOR1YJR159W 1074 nt10.87□□□□□ -0.67
TDP1P38319 SWE1YJL187C 2460 nt10.87□□□□□ -0.67
TDP1P38319 YDR433WYDR433W 441 nt10.86□□□□□ -0.67
TDP1P38319 ERV46YAL042W 1248 nt10.8□□□□□ -0.68
TDP1P38319 YIH1YCR059C 777 nt10.79□□□□□ -0.68
TDP1P38319 BOR1YNL275W 1731 nt10.78□□□□□ -0.68
TDP1P38319 RDN37-1RDN37-1 5354 nt10.77□□□□□ -0.69
TDP1P38319 RDN37-2RDN37-2 5354 nt10.77□□□□□ -0.69
TDP1P38319 CRR1YLR213C 1269 nt10.77□□□□□ -0.69
TDP1P38319 ERF2YLR246W 1080 nt10.77□□□□□ -0.69
TDP1P38319 FRD1YEL047C 1413 nt10.76□□□□□ -0.69
TDP1P38319 LPX1YOR084W 1164 nt10.76□□□□□ -0.69
TDP1P38319 YCL042WYCL042W 360 nt10.76□□□□□ -0.69
TDP1P38319 YKR040CYKR040C 504 nt10.75□□□□□ -0.69
TDP1P38319 RNQ1YCL028W 1218 nt10.73□□□□□ -0.69
TDP1P38319 YLL053CYLL053C 459 nt10.72□□□□□ -0.69
TDP1P38319 YHR056W-AYHR056W-A 435 nt10.7□□□□□ -0.7
TDP1P38319 ATF2YGR177C 1608 nt10.68□□□□□ -0.7
TDP1P38319 HSP60YLR259C 1719 nt10.67□□□□□ -0.7
TDP1P38319 MIC10YCL057C-A 294 nt10.66□□□□□ -0.7
TDP1P38319 HEM12YDR047W 1089 nt10.64□□□□□ -0.71
TDP1P38319 SNG1YGR197C 1644 nt10.62□□□□□ -0.71
TDP1P38319 FTR1YER145C 1215 nt10.62□□□□□ -0.71
TDP1P38319 YFL067WYFL067W 528 nt10.59□□□□□ -0.71
TDP1P38319 DIC1YLR348C 897 nt10.59□□□□□ -0.71
TDP1P38319 GAL1YBR020W 1587 nt10.58□□□□□ -0.72
TDP1P38319 RAX1YOR301W 1308 nt10.58□□□□□ -0.72
TDP1P38319 CCA1YER168C 1641 nt10.57□□□□□ -0.72
TDP1P38319 TRM5YHR070W 1500 nt10.57□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 75.2 ms