Protein–RNA interactions for Protein: P35178

RRP1, Ribosomal RNA-processing protein 1, yeastyeast

Predicted RBP Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP1P35178 GUT2YIL155C 1950 nt13.12□□□□□ -0.31
RRP1P35178 ART5YGR068C 1761 nt13.12□□□□□ -0.31
RRP1P35178 SHU1YHL006C 453 nt13.09□□□□□ -0.31
RRP1P35178 GFD2YCL036W 1701 nt13.09□□□□□ -0.31
RRP1P35178 YFL021C-AYFL021C-A 855 nt13.06□□□□□ -0.32
RRP1P35178 RTS2YOR077W 699 nt13.06□□□□□ -0.32
RRP1P35178 YKL097CYKL097C 411 nt13.04□□□□□ -0.32
RRP1P35178 YSC84YHR016C 1407 nt13.04□□□□□ -0.32
RRP1P35178 YGR021WYGR021W 873 nt13.02□□□□□ -0.33
RRP1P35178 NVJ2YPR091C 2313 nt13.01□□□□□ -0.33
RRP1P35178 PET9YBL030C 957 nt12.99□□□□□ -0.33
RRP1P35178 HOM6YJR139C 1080 nt12.91□□□□□ -0.34
RRP1P35178 YAL037C-BYAL037C-B 975 nt12.91□□□□□ -0.34
RRP1P35178 YHL050CYHL050C 2094 nt12.91□□□□□ -0.34
RRP1P35178 YCH1YGR203W 447 nt12.9□□□□□ -0.34
RRP1P35178 CUE1YMR264W 612 nt12.9□□□□□ -0.34
RRP1P35178 RRT12YCR045C 1476 nt12.87□□□□□ -0.35
RRP1P35178 YNL195CYNL195C 786 nt12.87□□□□□ -0.35
RRP1P35178 TIR4YOR009W 1464 nt12.85□□□□□ -0.35
RRP1P35178 PIB2YGL023C 1908 nt12.84□□□□□ -0.35
RRP1P35178 RTF1YGL244W 1677 nt12.83□□□□□ -0.35
RRP1P35178 YIL100WYIL100W 354 nt12.82□□□□□ -0.36
RRP1P35178 YMR057CYMR057C 372 nt12.82□□□□□ -0.36
RRP1P35178 MNP1YGL068W 585 nt12.78□□□□□ -0.36
RRP1P35178 BOP3YNL042W 1191 nt12.75□□□□□ -0.37
RRP1P35178 RKM5YLR137W 1104 nt12.73□□□□□ -0.37
RRP1P35178 YLR236CYLR236C 324 nt12.7□□□□□ -0.38
RRP1P35178 FPS1YLL043W 2010 nt12.67□□□□□ -0.38
RRP1P35178 YJL152WYJL152W 360 nt12.63□□□□□ -0.39
RRP1P35178 PTK1YKL198C 1989 nt12.61□□□□□ -0.39
RRP1P35178 YCL048W-AYCL048W-A 240 nt12.57□□□□□ -0.4
RRP1P35178 NPL3YDR432W 1245 nt12.56□□□□□ -0.4
RRP1P35178 YOR139CYOR139C 393 nt12.54□□□□□ -0.4
RRP1P35178 YLR154C-GYLR154C-G 150 nt12.52□□□□□ -0.41
RRP1P35178 NCP1YHR042W 2076 nt12.49□□□□□ -0.41
RRP1P35178 YFL054CYFL054C 1941 nt12.43□□□□□ -0.42
RRP1P35178 YOL037CYOL037C 354 nt12.43□□□□□ -0.42
RRP1P35178 LCB1YMR296C 1677 nt12.33□□□□□ -0.44
RRP1P35178 SPT8YLR055C 1809 nt12.3□□□□□ -0.44
RRP1P35178 BOR1YNL275W 1731 nt12.24□□□□□ -0.45
RRP1P35178 SIM1YIL123W 1431 nt12.2□□□□□ -0.46
RRP1P35178 RRD1YIL153W 1182 nt12.18□□□□□ -0.46
RRP1P35178 IDH1YNL037C 1083 nt12.17□□□□□ -0.46
RRP1P35178 YJL225CYJL225C 5277 nt12.16□□□□□ -0.46
RRP1P35178 YLR281CYLR281C 468 nt12.16□□□□□ -0.46
RRP1P35178 WHI5YOR083W 888 nt12.16□□□□□ -0.46
RRP1P35178 GBP2YCL011C 1284 nt12.16□□□□□ -0.46
RRP1P35178 FMP52YER004W 696 nt12.15□□□□□ -0.46
RRP1P35178 PCM1YEL058W 1674 nt12.13□□□□□ -0.47
RRP1P35178 TCD2YKL027W 1344 nt12.11□□□□□ -0.47
RRP1P35178 tM(CAU)CtM(CAU)C 72 nt12.07□□□□□ -0.48
RRP1P35178 IMT4tM(CAU)E 72 nt12.07□□□□□ -0.48
RRP1P35178 IMT3tM(CAU)J3 72 nt12.07□□□□□ -0.48
RRP1P35178 IMT1tM(CAU)O1 72 nt12.07□□□□□ -0.48
RRP1P35178 IMT2tM(CAU)P 72 nt12.07□□□□□ -0.48
RRP1P35178 SWE1YJL187C 2460 nt12.06□□□□□ -0.48
RRP1P35178 LYS4YDR234W 2082 nt12.06□□□□□ -0.48
RRP1P35178 DED1YOR204W 1815 nt12.06□□□□□ -0.48
RRP1P35178 UME6YDR207C 2511 nt12.04□□□□□ -0.48
RRP1P35178 Q0182Q0182 405 nt12.04□□□□□ -0.48
RRP1P35178 PUS2YGL063W 1113 nt12.02□□□□□ -0.49
RRP1P35178 SNF6YHL025W 999 nt12.02□□□□□ -0.49
RRP1P35178 CWP1YKL096W 720 nt12.02□□□□□ -0.49
RRP1P35178 FMT1YBL013W 1206 nt12□□□□□ -0.49
RRP1P35178 ADH2YMR303C 1047 nt12□□□□□ -0.49
RRP1P35178 BIO4YNR057C 714 nt12□□□□□ -0.49
RRP1P35178 HSP60YLR259C 1719 nt11.94□□□□□ -0.5
RRP1P35178 YDR433WYDR433W 441 nt11.91□□□□□ -0.5
RRP1P35178 IMP2'YIL154C 1041 nt11.9□□□□□ -0.5
RRP1P35178 ERF2YLR246W 1080 nt11.89□□□□□ -0.51
RRP1P35178 YCL042WYCL042W 360 nt11.86□□□□□ -0.51
RRP1P35178 DSK2YMR276W 1122 nt11.85□□□□□ -0.51
RRP1P35178 GLK1YCL040W 1503 nt11.85□□□□□ -0.51
RRP1P35178 MXR2YCL033C 507 nt11.84□□□□□ -0.51
RRP1P35178 CRR1YLR213C 1269 nt11.82□□□□□ -0.52
RRP1P35178 YPR011CYPR011C 981 nt11.82□□□□□ -0.52
RRP1P35178 SOR2YDL246C 1074 nt11.79□□□□□ -0.52
RRP1P35178 YHR056W-AYHR056W-A 435 nt11.79□□□□□ -0.52
RRP1P35178 SOR1YJR159W 1074 nt11.79□□□□□ -0.52
RRP1P35178 YIH1YCR059C 777 nt11.78□□□□□ -0.52
RRP1P35178 YLL053CYLL053C 459 nt11.78□□□□□ -0.52
RRP1P35178 FMP45YDL222C 930 nt11.77□□□□□ -0.53
RRP1P35178 HEM12YDR047W 1089 nt11.77□□□□□ -0.53
RRP1P35178 FUR4YBR021W 1902 nt11.76□□□□□ -0.53
RRP1P35178 RNQ1YCL028W 1218 nt11.74□□□□□ -0.53
RRP1P35178 RAX1YOR301W 1308 nt11.74□□□□□ -0.53
RRP1P35178 MIC10YCL057C-A 294 nt11.73□□□□□ -0.53
RRP1P35178 ALG12YNR030W 1656 nt11.72□□□□□ -0.53
RRP1P35178 ATF2YGR177C 1608 nt11.71□□□□□ -0.54
RRP1P35178 RDN37-1RDN37-1 5354 nt11.7□□□□□ -0.54
RRP1P35178 RDN37-2RDN37-2 5354 nt11.7□□□□□ -0.54
RRP1P35178 CCA1YER168C 1641 nt11.7□□□□□ -0.54
RRP1P35178 YFL067WYFL067W 528 nt11.69□□□□□ -0.54
RRP1P35178 SNG1YGR197C 1644 nt11.68□□□□□ -0.54
RRP1P35178 YKR040CYKR040C 504 nt11.66□□□□□ -0.54
RRP1P35178 FRD1YEL047C 1413 nt11.65□□□□□ -0.54
RRP1P35178 FTR1YER145C 1215 nt11.64□□□□□ -0.55
RRP1P35178 DDR2YOL052C-A 186 nt11.64□□□□□ -0.55
RRP1P35178 PRP4YPR178W 1398 nt11.64□□□□□ -0.55
RRP1P35178 ERV46YAL042W 1248 nt11.63□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms