Protein–RNA interactions for Protein: P29539

RIF1, Telomere length regulator protein RIF1, yeastyeast

Predictions only

Length 1,916 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIF1P29539 SUF2tP(AGG)C 72 nt13.29□□□□□ -0.28
RIF1P29539 SUF10tP(AGG)N 72 nt13.29□□□□□ -0.28
RIF1P29539 SPT5YML010W 3192 nt13.28□□□□□ -0.28
RIF1P29539 YDR095CYDR095C 411 nt13.27□□□□□ -0.28
RIF1P29539 YJL152WYJL152W 360 nt13.27□□□□□ -0.29
RIF1P29539 ALF1YNL148C 765 nt13.26□□□□□ -0.29
RIF1P29539 ERV46YAL042W 1248 nt13.25□□□□□ -0.29
RIF1P29539 YPS1YLR120C 1710 nt13.23□□□□□ -0.29
RIF1P29539 RTG1YOL067C 534 nt13.21□□□□□ -0.29
RIF1P29539 YCH1YGR203W 447 nt13.19□□□□□ -0.3
RIF1P29539 MRPL8YJL063C 717 nt13.11□□□□□ -0.31
RIF1P29539 IDH1YNL037C 1083 nt13.11□□□□□ -0.31
RIF1P29539 TIR4YOR009W 1464 nt13.1□□□□□ -0.31
RIF1P29539 SSA4YER103W 1929 nt13.09□□□□□ -0.31
RIF1P29539 SIS1YNL007C 1059 nt13.07□□□□□ -0.32
RIF1P29539 SPP1YPL138C 1062 nt13.07□□□□□ -0.32
RIF1P29539 ADO1YJR105W 1023 nt13.03□□□□□ -0.32
RIF1P29539 MXR2YCL033C 507 nt13.03□□□□□ -0.32
RIF1P29539 YEL076C-AYEL076C-A 651 nt13.02□□□□□ -0.32
RIF1P29539 YEL076CYEL076C 651 nt13.02□□□□□ -0.32
RIF1P29539 YLR464WYLR464W 651 nt13.02□□□□□ -0.32
RIF1P29539 DCW1YKL046C 1350 nt13.01□□□□□ -0.33
RIF1P29539 MEP2YNL142W 1500 nt13.01□□□□□ -0.33
RIF1P29539 YHR165W-AYHR165W-A 312 nt12.99□□□□□ -0.33
RIF1P29539 GBP2YCL011C 1284 nt12.99□□□□□ -0.33
RIF1P29539 YDR433WYDR433W 441 nt12.9□□□□□ -0.34
RIF1P29539 GFD2YCL036W 1701 nt12.89□□□□□ -0.35
RIF1P29539 YCL048W-AYCL048W-A 240 nt12.88□□□□□ -0.35
RIF1P29539 YKR040CYKR040C 504 nt12.87□□□□□ -0.35
RIF1P29539 RPP2AYOL039W 321 nt12.86□□□□□ -0.35
RIF1P29539 ART5YGR068C 1761 nt12.86□□□□□ -0.35
RIF1P29539 CAC2YML102W 1407 nt12.83□□□□□ -0.36
RIF1P29539 PTP1YDL230W 1008 nt12.83□□□□□ -0.36
RIF1P29539 UBX6YJL048C 1191 nt12.82□□□□□ -0.36
RIF1P29539 EMI2YDR516C 1503 nt12.8□□□□□ -0.36
RIF1P29539 TCD2YKL027W 1344 nt12.77□□□□□ -0.37
RIF1P29539 YDR094WYDR094W 336 nt12.76□□□□□ -0.37
RIF1P29539 YMR057CYMR057C 372 nt12.76□□□□□ -0.37
RIF1P29539 PTH1YHR189W 573 nt12.75□□□□□ -0.37
RIF1P29539 RTS2YOR077W 699 nt12.72□□□□□ -0.37
RIF1P29539 PET9YBL030C 957 nt12.7□□□□□ -0.38
RIF1P29539 SOR2YDL246C 1074 nt12.68□□□□□ -0.38
RIF1P29539 SOR1YJR159W 1074 nt12.68□□□□□ -0.38
RIF1P29539 FRD1YEL047C 1413 nt12.65□□□□□ -0.38
RIF1P29539 DED1YOR204W 1815 nt12.63□□□□□ -0.39
RIF1P29539 HUA1YGR268C 597 nt12.61□□□□□ -0.39
RIF1P29539 RRD1YIL153W 1182 nt12.59□□□□□ -0.39
RIF1P29539 IRC15YPL017C 1500 nt12.55□□□□□ -0.4
RIF1P29539 FPS1YLL043W 2010 nt12.54□□□□□ -0.4
RIF1P29539 SDH1YKL148C 1923 nt12.53□□□□□ -0.4
RIF1P29539 CUE1YMR264W 612 nt12.52□□□□□ -0.4
RIF1P29539 YCL042WYCL042W 360 nt12.52□□□□□ -0.4
RIF1P29539 YLR235CYLR235C 399 nt12.5□□□□□ -0.41
RIF1P29539 YFL015W-AYFL015W-A 318 nt12.49□□□□□ -0.41
RIF1P29539 FMT1YBL013W 1206 nt12.49□□□□□ -0.41
RIF1P29539 YBR220CYBR220C 1683 nt12.47□□□□□ -0.41
RIF1P29539 YDL221WYDL221W 552 nt12.47□□□□□ -0.41
RIF1P29539 YMR090WYMR090W 684 nt12.42□□□□□ -0.42
RIF1P29539 BDF1YLR399C 2061 nt12.4□□□□□ -0.42
RIF1P29539 LCB1YMR296C 1677 nt12.39□□□□□ -0.43
RIF1P29539 FMP52YER004W 696 nt12.39□□□□□ -0.43
RIF1P29539 PAU16YKL224C 372 nt12.38□□□□□ -0.43
RIF1P29539 YSC84YHR016C 1407 nt12.37□□□□□ -0.43
RIF1P29539 YKL030WYKL030W 606 nt12.37□□□□□ -0.43
RIF1P29539 TIM23YNR017W 669 nt12.37□□□□□ -0.43
RIF1P29539 SCC4YER147C 1875 nt12.34□□□□□ -0.43
RIF1P29539 PRE6YOL038W 765 nt12.33□□□□□ -0.44
RIF1P29539 YFR018CYFR018C 1092 nt12.33□□□□□ -0.44
RIF1P29539 TAT1YBR069C 1860 nt12.32□□□□□ -0.44
RIF1P29539 CWP1YKL096W 720 nt12.27□□□□□ -0.44
RIF1P29539 tL(GAG)GtL(GAG)G 82 nt12.24□□□□□ -0.45
RIF1P29539 DIC1YLR348C 897 nt12.24□□□□□ -0.45
RIF1P29539 YIL100WYIL100W 354 nt12.23□□□□□ -0.45
RIF1P29539 GIS3YLR094C 1509 nt12.23□□□□□ -0.45
RIF1P29539 YLR179CYLR179C 606 nt12.23□□□□□ -0.45
RIF1P29539 ADH2YMR303C 1047 nt12.21□□□□□ -0.45
RIF1P29539 RRT12YCR045C 1476 nt12.15□□□□□ -0.46
RIF1P29539 YPR064WYPR064W 420 nt12.14□□□□□ -0.47
RIF1P29539 YIH1YCR059C 777 nt12.11□□□□□ -0.47
RIF1P29539 YHL050CYHL050C 2094 nt12.11□□□□□ -0.47
RIF1P29539 SBA1YKL117W 651 nt12.09□□□□□ -0.47
RIF1P29539 SNF6YHL025W 999 nt12.08□□□□□ -0.48
RIF1P29539 WSC2YNL283C 1512 nt12.02□□□□□ -0.48
RIF1P29539 RRT5YFR032C 870 nt12.01□□□□□ -0.49
RIF1P29539 PCM1YEL058W 1674 nt12□□□□□ -0.49
RIF1P29539 YLL053CYLL053C 459 nt11.98□□□□□ -0.49
RIF1P29539 FTR1YER145C 1215 nt11.97□□□□□ -0.49
RIF1P29539 PEX25YPL112C 1185 nt11.97□□□□□ -0.49
RIF1P29539 YNL195CYNL195C 786 nt11.95□□□□□ -0.5
RIF1P29539 TAD3YLR316C 969 nt11.94□□□□□ -0.5
RIF1P29539 BIO4YNR057C 714 nt11.94□□□□□ -0.5
RIF1P29539 PCH2YBR186W 1695 nt11.92□□□□□ -0.5
RIF1P29539 SEC11YIR022W 504 nt11.92□□□□□ -0.5
RIF1P29539 YFL066CYFL066C 1179 nt11.9□□□□□ -0.5
RIF1P29539 ATF2YGR177C 1608 nt11.87□□□□□ -0.51
RIF1P29539 RNQ1YCL028W 1218 nt11.86□□□□□ -0.51
RIF1P29539 AQY1YPR192W 918 nt11.86□□□□□ -0.51
RIF1P29539 AHT1YHR093W 549 nt11.84□□□□□ -0.51
RIF1P29539 YSP3YOR003W 1437 nt11.8□□□□□ -0.52
RIF1P29539 YLR415CYLR415C 339 nt11.79□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms