Protein–RNA interactions for Protein: P0CX47

RPS11A, 40S ribosomal protein S11-A, yeastyeast

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS11AP0CX47 YDL221WYDL221W 552 nt9.15□□□□□ -0.94
RPS11AP0CX47 YCH1YGR203W 447 nt9.15□□□□□ -0.94
RPS11AP0CX47 YLR154C-GYLR154C-G 150 nt9.13□□□□□ -0.95
RPS11AP0CX47 PET9YBL030C 957 nt9.13□□□□□ -0.95
RPS11AP0CX47 ART5YGR068C 1761 nt9.12□□□□□ -0.95
RPS11AP0CX47 GFD2YCL036W 1701 nt9.09□□□□□ -0.95
RPS11AP0CX47 YLR281CYLR281C 468 nt9.09□□□□□ -0.95
RPS11AP0CX47 WHI5YOR083W 888 nt9.08□□□□□ -0.96
RPS11AP0CX47 TIR4YOR009W 1464 nt9.08□□□□□ -0.96
RPS11AP0CX47 YJL152WYJL152W 360 nt9.07□□□□□ -0.96
RPS11AP0CX47 YBR220CYBR220C 1683 nt9.04□□□□□ -0.96
RPS11AP0CX47 SDH1YKL148C 1923 nt9.03□□□□□ -0.96
RPS11AP0CX47 IRC15YPL017C 1500 nt9.03□□□□□ -0.96
RPS11AP0CX47 BDF1YLR399C 2061 nt9.02□□□□□ -0.97
RPS11AP0CX47 YMR057CYMR057C 372 nt8.99□□□□□ -0.97
RPS11AP0CX47 SCC4YER147C 1875 nt8.98□□□□□ -0.97
RPS11AP0CX47 RTS2YOR077W 699 nt8.98□□□□□ -0.97
RPS11AP0CX47 GIS3YLR094C 1509 nt8.97□□□□□ -0.97
RPS11AP0CX47 PUS2YGL063W 1113 nt8.96□□□□□ -0.98
RPS11AP0CX47 IMP2'YIL154C 1041 nt8.96□□□□□ -0.98
RPS11AP0CX47 YCL048W-AYCL048W-A 240 nt8.96□□□□□ -0.98
RPS11AP0CX47 tM(CAU)CtM(CAU)C 72 nt8.95□□□□□ -0.98
RPS11AP0CX47 IMT4tM(CAU)E 72 nt8.95□□□□□ -0.98
RPS11AP0CX47 IMT3tM(CAU)J3 72 nt8.95□□□□□ -0.98
RPS11AP0CX47 IMT1tM(CAU)O1 72 nt8.95□□□□□ -0.98
RPS11AP0CX47 IMT2tM(CAU)P 72 nt8.95□□□□□ -0.98
RPS11AP0CX47 CUE1YMR264W 612 nt8.95□□□□□ -0.98
RPS11AP0CX47 IDH1YNL037C 1083 nt8.91□□□□□ -0.98
RPS11AP0CX47 TAT1YBR069C 1860 nt8.91□□□□□ -0.98
RPS11AP0CX47 DSK2YMR276W 1122 nt8.89□□□□□ -0.99
RPS11AP0CX47 YIL100WYIL100W 354 nt8.88□□□□□ -0.99
RPS11AP0CX47 YLR236CYLR236C 324 nt8.88□□□□□ -0.99
RPS11AP0CX47 FPS1YLL043W 2010 nt8.87□□□□□ -0.99
RPS11AP0CX47 GBP2YCL011C 1284 nt8.83□□□□□ -1
RPS11AP0CX47 YJL225CYJL225C 5277 nt8.82□□□□□ -1
RPS11AP0CX47 SEC11YIR022W 504 nt8.81□□□□□ -1
RPS11AP0CX47 YNL195CYNL195C 786 nt8.81□□□□□ -1
RPS11AP0CX47 TCD2YKL027W 1344 nt8.76□□□□□ -1.01
RPS11AP0CX47 YSC84YHR016C 1407 nt8.74□□□□□ -1.01
RPS11AP0CX47 YDR433WYDR433W 441 nt8.74□□□□□ -1.01
RPS11AP0CX47 FMP45YDL222C 930 nt8.73□□□□□ -1.01
RPS11AP0CX47 YPR011CYPR011C 981 nt8.73□□□□□ -1.01
RPS11AP0CX47 ERV46YAL042W 1248 nt8.71□□□□□ -1.02
RPS11AP0CX47 PCH2YBR186W 1695 nt8.7□□□□□ -1.02
RPS11AP0CX47 FMP52YER004W 696 nt8.69□□□□□ -1.02
RPS11AP0CX47 RRD1YIL153W 1182 nt8.69□□□□□ -1.02
RPS11AP0CX47 RDN37-1RDN37-1 5354 nt8.67□□□□□ -1.02
RPS11AP0CX47 RDN37-2RDN37-2 5354 nt8.67□□□□□ -1.02
RPS11AP0CX47 RRT12YCR045C 1476 nt8.67□□□□□ -1.02
RPS11AP0CX47 YHL050CYHL050C 2094 nt8.67□□□□□ -1.02
RPS11AP0CX47 YKR040CYKR040C 504 nt8.66□□□□□ -1.02
RPS11AP0CX47 LPX1YOR084W 1164 nt8.66□□□□□ -1.02
RPS11AP0CX47 DED1YOR204W 1815 nt8.64□□□□□ -1.03
RPS11AP0CX47 GUT2YIL155C 1950 nt8.63□□□□□ -1.03
RPS11AP0CX47 MXR2YCL033C 507 nt8.63□□□□□ -1.03
RPS11AP0CX47 YCL042WYCL042W 360 nt8.59□□□□□ -1.03
RPS11AP0CX47 SOR2YDL246C 1074 nt8.57□□□□□ -1.04
RPS11AP0CX47 SOR1YJR159W 1074 nt8.57□□□□□ -1.04
RPS11AP0CX47 MOT3YMR070W 1473 nt8.57□□□□□ -1.04
RPS11AP0CX47 FMT1YBL013W 1206 nt8.56□□□□□ -1.04
RPS11AP0CX47 PCM1YEL058W 1674 nt8.54□□□□□ -1.04
RPS11AP0CX47 CWP1YKL096W 720 nt8.54□□□□□ -1.04
RPS11AP0CX47 BOP3YNL042W 1191 nt8.53□□□□□ -1.04
RPS11AP0CX47 PAC11YDR488C 1602 nt8.52□□□□□ -1.05
RPS11AP0CX47 SNF6YHL025W 999 nt8.52□□□□□ -1.05
RPS11AP0CX47 RTF1YGL244W 1677 nt8.52□□□□□ -1.05
RPS11AP0CX47 ADH2YMR303C 1047 nt8.51□□□□□ -1.05
RPS11AP0CX47 FRD1YEL047C 1413 nt8.51□□□□□ -1.05
RPS11AP0CX47 PIB2YGL023C 1908 nt8.49□□□□□ -1.05
RPS11AP0CX47 SIM1YIL123W 1431 nt8.46□□□□□ -1.06
RPS11AP0CX47 LCB1YMR296C 1677 nt8.43□□□□□ -1.06
RPS11AP0CX47 YIH1YCR059C 777 nt8.41□□□□□ -1.06
RPS11AP0CX47 SPP1YPL138C 1062 nt8.41□□□□□ -1.06
RPS11AP0CX47 NVJ2YPR091C 2313 nt8.41□□□□□ -1.06
RPS11AP0CX47 NCP1YHR042W 2076 nt8.41□□□□□ -1.06
RPS11AP0CX47 BIO4YNR057C 714 nt8.4□□□□□ -1.06
RPS11AP0CX47 RNQ1YCL028W 1218 nt8.4□□□□□ -1.06
RPS11AP0CX47 YLR235CYLR235C 399 nt8.39□□□□□ -1.07
RPS11AP0CX47 DIC1YLR348C 897 nt8.36□□□□□ -1.07
RPS11AP0CX47 PTH1YHR189W 573 nt8.34□□□□□ -1.07
RPS11AP0CX47 ERF2YLR246W 1080 nt8.34□□□□□ -1.07
RPS11AP0CX47 PTK1YKL198C 1989 nt8.33□□□□□ -1.08
RPS11AP0CX47 YLL053CYLL053C 459 nt8.33□□□□□ -1.08
RPS11AP0CX47 YKL030WYKL030W 606 nt8.29□□□□□ -1.08
RPS11AP0CX47 TIM23YNR017W 669 nt8.29□□□□□ -1.08
RPS11AP0CX47 FTR1YER145C 1215 nt8.28□□□□□ -1.08
RPS11AP0CX47 CRR1YLR213C 1269 nt8.27□□□□□ -1.09
RPS11AP0CX47 AQY1YPR192W 918 nt8.27□□□□□ -1.09
RPS11AP0CX47 YFL067WYFL067W 528 nt8.26□□□□□ -1.09
RPS11AP0CX47 MRPL8YJL063C 717 nt8.25□□□□□ -1.09
RPS11AP0CX47 YLR179CYLR179C 606 nt8.25□□□□□ -1.09
RPS11AP0CX47 RTG1YOL067C 534 nt8.25□□□□□ -1.09
RPS11AP0CX47 LYS4YDR234W 2082 nt8.24□□□□□ -1.09
RPS11AP0CX47 YFL054CYFL054C 1941 nt8.24□□□□□ -1.09
RPS11AP0CX47 GAL1YBR020W 1587 nt8.23□□□□□ -1.09
RPS11AP0CX47 DDR2YOL052C-A 186 nt8.23□□□□□ -1.09
RPS11AP0CX47 YEL076C-AYEL076C-A 651 nt8.22□□□□□ -1.09
RPS11AP0CX47 YEL076CYEL076C 651 nt8.22□□□□□ -1.09
RPS11AP0CX47 YLR464WYLR464W 651 nt8.22□□□□□ -1.09
RPS11AP0CX47 TRM5YHR070W 1500 nt8.21□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms