Protein–RNA interactions for Protein: P0CX44

RPL1B, 60S ribosomal protein L1-B, yeastyeast

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL1BP0CX44 YLR154C-GYLR154C-G 150 nt11.87□□□□□ -0.51
RPL1BP0CX44 CCT6YDR188W 1641 nt11.86□□□□□ -0.51
RPL1BP0CX44 SUF2tP(AGG)C 72 nt11.7□□□□□ -0.54
RPL1BP0CX44 SUF10tP(AGG)N 72 nt11.7□□□□□ -0.54
RPL1BP0CX44 ADO1YJR105W 1023 nt11.69□□□□□ -0.54
RPL1BP0CX44 LPX1YOR084W 1164 nt11.68□□□□□ -0.54
RPL1BP0CX44 ERV46YAL042W 1248 nt11.67□□□□□ -0.54
RPL1BP0CX44 ALF1YNL148C 765 nt11.66□□□□□ -0.54
RPL1BP0CX44 SPT5YML010W 3192 nt11.65□□□□□ -0.54
RPL1BP0CX44 YEL076C-AYEL076C-A 651 nt11.64□□□□□ -0.55
RPL1BP0CX44 YEL076CYEL076C 651 nt11.64□□□□□ -0.55
RPL1BP0CX44 YJL152WYJL152W 360 nt11.64□□□□□ -0.55
RPL1BP0CX44 YLR464WYLR464W 651 nt11.64□□□□□ -0.55
RPL1BP0CX44 SPP1YPL138C 1062 nt11.63□□□□□ -0.55
RPL1BP0CX44 UBX6YJL048C 1191 nt11.6□□□□□ -0.55
RPL1BP0CX44 IDH1YNL037C 1083 nt11.59□□□□□ -0.55
RPL1BP0CX44 RTG1YOL067C 534 nt11.59□□□□□ -0.55
RPL1BP0CX44 SIS1YNL007C 1059 nt11.54□□□□□ -0.56
RPL1BP0CX44 YPS1YLR120C 1710 nt11.53□□□□□ -0.56
RPL1BP0CX44 YDR095CYDR095C 411 nt11.53□□□□□ -0.56
RPL1BP0CX44 YDR433WYDR433W 441 nt11.53□□□□□ -0.56
RPL1BP0CX44 YKR040CYKR040C 504 nt11.52□□□□□ -0.57
RPL1BP0CX44 TIR4YOR009W 1464 nt11.44□□□□□ -0.58
RPL1BP0CX44 GBP2YCL011C 1284 nt11.44□□□□□ -0.58
RPL1BP0CX44 MXR2YCL033C 507 nt11.4□□□□□ -0.58
RPL1BP0CX44 YHR165W-AYHR165W-A 312 nt11.36□□□□□ -0.59
RPL1BP0CX44 HUA1YGR268C 597 nt11.35□□□□□ -0.59
RPL1BP0CX44 MEP2YNL142W 1500 nt11.32□□□□□ -0.6
RPL1BP0CX44 CAC2YML102W 1407 nt11.32□□□□□ -0.6
RPL1BP0CX44 YDR094WYDR094W 336 nt11.31□□□□□ -0.6
RPL1BP0CX44 RPP2AYOL039W 321 nt11.31□□□□□ -0.6
RPL1BP0CX44 ART5YGR068C 1761 nt11.27□□□□□ -0.61
RPL1BP0CX44 YMR057CYMR057C 372 nt11.26□□□□□ -0.61
RPL1BP0CX44 YCL048W-AYCL048W-A 240 nt11.26□□□□□ -0.61
RPL1BP0CX44 PET9YBL030C 957 nt11.25□□□□□ -0.61
RPL1BP0CX44 PTP1YDL230W 1008 nt11.24□□□□□ -0.61
RPL1BP0CX44 SSA4YER103W 1929 nt11.24□□□□□ -0.61
RPL1BP0CX44 TCD2YKL027W 1344 nt11.24□□□□□ -0.61
RPL1BP0CX44 YFL015W-AYFL015W-A 318 nt11.23□□□□□ -0.61
RPL1BP0CX44 FRD1YEL047C 1413 nt11.19□□□□□ -0.62
RPL1BP0CX44 GFD2YCL036W 1701 nt11.18□□□□□ -0.62
RPL1BP0CX44 DED1YOR204W 1815 nt11.16□□□□□ -0.62
RPL1BP0CX44 DCW1YKL046C 1350 nt11.15□□□□□ -0.63
RPL1BP0CX44 RRD1YIL153W 1182 nt11.11□□□□□ -0.63
RPL1BP0CX44 PTH1YHR189W 573 nt11.08□□□□□ -0.64
RPL1BP0CX44 YKL030WYKL030W 606 nt11.08□□□□□ -0.64
RPL1BP0CX44 YLR235CYLR235C 399 nt11.06□□□□□ -0.64
RPL1BP0CX44 FPS1YLL043W 2010 nt11.06□□□□□ -0.64
RPL1BP0CX44 YCL042WYCL042W 360 nt11.04□□□□□ -0.64
RPL1BP0CX44 SOR2YDL246C 1074 nt11.03□□□□□ -0.64
RPL1BP0CX44 SOR1YJR159W 1074 nt11.03□□□□□ -0.64
RPL1BP0CX44 FMT1YBL013W 1206 nt11.02□□□□□ -0.65
RPL1BP0CX44 EMI2YDR516C 1503 nt10.99□□□□□ -0.65
RPL1BP0CX44 LCB1YMR296C 1677 nt10.98□□□□□ -0.65
RPL1BP0CX44 RTS2YOR077W 699 nt10.96□□□□□ -0.65
RPL1BP0CX44 YDL221WYDL221W 552 nt10.91□□□□□ -0.66
RPL1BP0CX44 SBA1YKL117W 651 nt10.9□□□□□ -0.66
RPL1BP0CX44 YMR090WYMR090W 684 nt10.9□□□□□ -0.66
RPL1BP0CX44 PAU16YKL224C 372 nt10.89□□□□□ -0.67
RPL1BP0CX44 CUE1YMR264W 612 nt10.89□□□□□ -0.67
RPL1BP0CX44 IRC15YPL017C 1500 nt10.89□□□□□ -0.67
RPL1BP0CX44 FMP52YER004W 696 nt10.88□□□□□ -0.67
RPL1BP0CX44 YFR018CYFR018C 1092 nt10.88□□□□□ -0.67
RPL1BP0CX44 YBR220CYBR220C 1683 nt10.85□□□□□ -0.67
RPL1BP0CX44 tL(GAG)GtL(GAG)G 82 nt10.84□□□□□ -0.67
RPL1BP0CX44 CWP1YKL096W 720 nt10.84□□□□□ -0.67
RPL1BP0CX44 BDF1YLR399C 2061 nt10.84□□□□□ -0.67
RPL1BP0CX44 RRT5YFR032C 870 nt10.82□□□□□ -0.68
RPL1BP0CX44 ADH2YMR303C 1047 nt10.81□□□□□ -0.68
RPL1BP0CX44 TIM23YNR017W 669 nt10.81□□□□□ -0.68
RPL1BP0CX44 SDH1YKL148C 1923 nt10.8□□□□□ -0.68
RPL1BP0CX44 PRE6YOL038W 765 nt10.79□□□□□ -0.68
RPL1BP0CX44 GIS3YLR094C 1509 nt10.78□□□□□ -0.68
RPL1BP0CX44 DIC1YLR348C 897 nt10.76□□□□□ -0.69
RPL1BP0CX44 YIL100WYIL100W 354 nt10.73□□□□□ -0.69
RPL1BP0CX44 YLR179CYLR179C 606 nt10.72□□□□□ -0.69
RPL1BP0CX44 SCC4YER147C 1875 nt10.72□□□□□ -0.69
RPL1BP0CX44 YPR064WYPR064W 420 nt10.7□□□□□ -0.7
RPL1BP0CX44 TAT1YBR069C 1860 nt10.7□□□□□ -0.7
RPL1BP0CX44 PCM1YEL058W 1674 nt10.67□□□□□ -0.7
RPL1BP0CX44 SNF6YHL025W 999 nt10.67□□□□□ -0.7
RPL1BP0CX44 TAD3YLR316C 969 nt10.67□□□□□ -0.7
RPL1BP0CX44 WSC2YNL283C 1512 nt10.64□□□□□ -0.71
RPL1BP0CX44 RNQ1YCL028W 1218 nt10.64□□□□□ -0.71
RPL1BP0CX44 AHT1YHR093W 549 nt10.63□□□□□ -0.71
RPL1BP0CX44 YIH1YCR059C 777 nt10.61□□□□□ -0.71
RPL1BP0CX44 YFL066CYFL066C 1179 nt10.59□□□□□ -0.71
RPL1BP0CX44 PEX25YPL112C 1185 nt10.56□□□□□ -0.72
RPL1BP0CX44 NAT4YMR069W 858 nt10.53□□□□□ -0.72
RPL1BP0CX44 YSP3YOR003W 1437 nt10.5□□□□□ -0.73
RPL1BP0CX44 BDH1YAL060W 1149 nt10.49□□□□□ -0.73
RPL1BP0CX44 YLL053CYLL053C 459 nt10.47□□□□□ -0.73
RPL1BP0CX44 AQY1YPR192W 918 nt10.47□□□□□ -0.73
RPL1BP0CX44 SEC11YIR022W 504 nt10.46□□□□□ -0.73
RPL1BP0CX44 YSC84YHR016C 1407 nt10.46□□□□□ -0.74
RPL1BP0CX44 YNL115CYNL115C 1935 nt10.46□□□□□ -0.74
RPL1BP0CX44 GLK1YCL040W 1503 nt10.44□□□□□ -0.74
RPL1BP0CX44 FTR1YER145C 1215 nt10.44□□□□□ -0.74
RPL1BP0CX44 YHL050CYHL050C 2094 nt10.44□□□□□ -0.74
RPL1BP0CX44 YNL195CYNL195C 786 nt10.43□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 29.3 ms