Protein–RNA interactions for Protein: P07703

RPC40, DNA-directed RNA polymerases I and III subunit RPAC1, yeastyeast

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPC40P07703 IRC15YPL017C 1500 nt11.5□□□□□ -0.57
RPC40P07703 MNP1YGL068W 585 nt11.48□□□□□ -0.57
RPC40P07703 SUF2tP(AGG)C 72 nt11.48□□□□□ -0.57
RPC40P07703 SUF10tP(AGG)N 72 nt11.48□□□□□ -0.57
RPC40P07703 ART5YGR068C 1761 nt11.44□□□□□ -0.58
RPC40P07703 GFD2YCL036W 1701 nt11.44□□□□□ -0.58
RPC40P07703 NVJ2YPR091C 2313 nt11.42□□□□□ -0.58
RPC40P07703 GIS3YLR094C 1509 nt11.42□□□□□ -0.58
RPC40P07703 SCC4YER147C 1875 nt11.42□□□□□ -0.58
RPC40P07703 RKM5YLR137W 1104 nt11.38□□□□□ -0.59
RPC40P07703 YKL097CYKL097C 411 nt11.35□□□□□ -0.59
RPC40P07703 RTS2YOR077W 699 nt11.35□□□□□ -0.59
RPC40P07703 TIR4YOR009W 1464 nt11.32□□□□□ -0.6
RPC40P07703 PET9YBL030C 957 nt11.31□□□□□ -0.6
RPC40P07703 PCH2YBR186W 1695 nt11.24□□□□□ -0.61
RPC40P07703 YCH1YGR203W 447 nt11.21□□□□□ -0.61
RPC40P07703 YMR057CYMR057C 372 nt11.21□□□□□ -0.61
RPC40P07703 GUT2YIL155C 1950 nt11.21□□□□□ -0.62
RPC40P07703 PAC11YDR488C 1602 nt11.2□□□□□ -0.62
RPC40P07703 NPL3YDR432W 1245 nt11.2□□□□□ -0.62
RPC40P07703 CUE1YMR264W 612 nt11.2□□□□□ -0.62
RPC40P07703 YSC84YHR016C 1407 nt11.19□□□□□ -0.62
RPC40P07703 SEC11YIR022W 504 nt11.18□□□□□ -0.62
RPC40P07703 YHL050CYHL050C 2094 nt11.17□□□□□ -0.62
RPC40P07703 RRT12YCR045C 1476 nt11.12□□□□□ -0.63
RPC40P07703 PIB2YGL023C 1908 nt11.11□□□□□ -0.63
RPC40P07703 YLR154C-GYLR154C-G 150 nt11.1□□□□□ -0.63
RPC40P07703 YOL037CYOL037C 354 nt11.07□□□□□ -0.64
RPC40P07703 RPM1RPM1 483 nt11.06□□□□□ -0.64
RPC40P07703 YJL152WYJL152W 360 nt11.05□□□□□ -0.64
RPC40P07703 YOR139CYOR139C 393 nt11.05□□□□□ -0.64
RPC40P07703 YIL100WYIL100W 354 nt11.01□□□□□ -0.65
RPC40P07703 YLR236CYLR236C 324 nt10.96□□□□□ -0.65
RPC40P07703 YNL195CYNL195C 786 nt10.95□□□□□ -0.66
RPC40P07703 RTF1YGL244W 1677 nt10.95□□□□□ -0.66
RPC40P07703 YCL048W-AYCL048W-A 240 nt10.94□□□□□ -0.66
RPC40P07703 WHI5YOR083W 888 nt10.91□□□□□ -0.66
RPC40P07703 YLR281CYLR281C 468 nt10.9□□□□□ -0.66
RPC40P07703 NCP1YHR042W 2076 nt10.86□□□□□ -0.67
RPC40P07703 PTK1YKL198C 1989 nt10.85□□□□□ -0.67
RPC40P07703 BOP3YNL042W 1191 nt10.85□□□□□ -0.67
RPC40P07703 RRD1YIL153W 1182 nt10.81□□□□□ -0.68
RPC40P07703 DED1YOR204W 1815 nt10.75□□□□□ -0.69
RPC40P07703 LCB1YMR296C 1677 nt10.75□□□□□ -0.69
RPC40P07703 IDH1YNL037C 1083 nt10.73□□□□□ -0.69
RPC40P07703 GBP2YCL011C 1284 nt10.73□□□□□ -0.69
RPC40P07703 FMT1YBL013W 1206 nt10.69□□□□□ -0.7
RPC40P07703 PUS2YGL063W 1113 nt10.67□□□□□ -0.7
RPC40P07703 YPR011CYPR011C 981 nt10.67□□□□□ -0.7
RPC40P07703 TCD2YKL027W 1344 nt10.63□□□□□ -0.71
RPC40P07703 FMP52YER004W 696 nt10.63□□□□□ -0.71
RPC40P07703 tM(CAU)CtM(CAU)C 72 nt10.63□□□□□ -0.71
RPC40P07703 IMT4tM(CAU)E 72 nt10.63□□□□□ -0.71
RPC40P07703 IMT3tM(CAU)J3 72 nt10.63□□□□□ -0.71
RPC40P07703 IMT1tM(CAU)O1 72 nt10.63□□□□□ -0.71
RPC40P07703 IMT2tM(CAU)P 72 nt10.63□□□□□ -0.71
RPC40P07703 DSK2YMR276W 1122 nt10.63□□□□□ -0.71
RPC40P07703 PCM1YEL058W 1674 nt10.62□□□□□ -0.71
RPC40P07703 MXR2YCL033C 507 nt10.6□□□□□ -0.71
RPC40P07703 IMP2'YIL154C 1041 nt10.58□□□□□ -0.72
RPC40P07703 YFL054CYFL054C 1941 nt10.58□□□□□ -0.72
RPC40P07703 ADH2YMR303C 1047 nt10.57□□□□□ -0.72
RPC40P07703 FMP45YDL222C 930 nt10.56□□□□□ -0.72
RPC40P07703 YDR433WYDR433W 441 nt10.56□□□□□ -0.72
RPC40P07703 SIM1YIL123W 1431 nt10.56□□□□□ -0.72
RPC40P07703 CWP1YKL096W 720 nt10.54□□□□□ -0.72
RPC40P07703 LYS4YDR234W 2082 nt10.54□□□□□ -0.72
RPC40P07703 SPT8YLR055C 1809 nt10.52□□□□□ -0.73
RPC40P07703 BIO4YNR057C 714 nt10.51□□□□□ -0.73
RPC40P07703 LPX1YOR084W 1164 nt10.51□□□□□ -0.73
RPC40P07703 FRE6YLL051C 2139 nt10.51□□□□□ -0.73
RPC40P07703 SOR2YDL246C 1074 nt10.49□□□□□ -0.73
RPC40P07703 SOR1YJR159W 1074 nt10.49□□□□□ -0.73
RPC40P07703 SNF6YHL025W 999 nt10.48□□□□□ -0.73
RPC40P07703 ERV46YAL042W 1248 nt10.48□□□□□ -0.73
RPC40P07703 FRD1YEL047C 1413 nt10.43□□□□□ -0.74
RPC40P07703 YKR040CYKR040C 504 nt10.42□□□□□ -0.74
RPC40P07703 YJL225CYJL225C 5277 nt10.41□□□□□ -0.74
RPC40P07703 YCL042WYCL042W 360 nt10.4□□□□□ -0.74
RPC40P07703 YIH1YCR059C 777 nt10.38□□□□□ -0.75
RPC40P07703 UME6YDR207C 2511 nt10.38□□□□□ -0.75
RPC40P07703 SWE1YJL187C 2460 nt10.36□□□□□ -0.75
RPC40P07703 YLL053CYLL053C 459 nt10.34□□□□□ -0.75
RPC40P07703 CRR1YLR213C 1269 nt10.34□□□□□ -0.75
RPC40P07703 RNQ1YCL028W 1218 nt10.32□□□□□ -0.76
RPC40P07703 ERF2YLR246W 1080 nt10.31□□□□□ -0.76
RPC40P07703 ATF2YGR177C 1608 nt10.29□□□□□ -0.76
RPC40P07703 MIC10YCL057C-A 294 nt10.27□□□□□ -0.77
RPC40P07703 DIC1YLR348C 897 nt10.24□□□□□ -0.77
RPC40P07703 FTR1YER145C 1215 nt10.23□□□□□ -0.77
RPC40P07703 YHR056W-AYHR056W-A 435 nt10.23□□□□□ -0.77
RPC40P07703 RDN37-1RDN37-1 5354 nt10.22□□□□□ -0.77
RPC40P07703 RDN37-2RDN37-2 5354 nt10.22□□□□□ -0.77
RPC40P07703 SNG1YGR197C 1644 nt10.22□□□□□ -0.77
RPC40P07703 HEM12YDR047W 1089 nt10.21□□□□□ -0.77
RPC40P07703 SPP1YPL138C 1062 nt10.21□□□□□ -0.77
RPC40P07703 GAL1YBR020W 1587 nt10.21□□□□□ -0.78
RPC40P07703 TRM5YHR070W 1500 nt10.2□□□□□ -0.78
RPC40P07703 BOR1YNL275W 1731 nt10.18□□□□□ -0.78
RPC40P07703 YFL067WYFL067W 528 nt10.16□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 39.5 ms