Protein–RNA interactions for Protein: O35516

Notch2, Neurogenic locus notch homolog protein 2, mousemouse

Predictions only

Length 2,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch2O35516 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.91■■□□□ 1.26
Notch2O35516 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.9■■□□□ 1.26
Notch2O35516 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Notch2O35516 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Notch2O35516 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.86■■□□□ 1.25
Notch2O35516 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Notch2O35516 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Notch2O35516 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.82■■□□□ 1.24
Notch2O35516 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.81■■□□□ 1.24
Notch2O35516 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.81■■□□□ 1.24
Notch2O35516 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Notch2O35516 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Notch2O35516 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Notch2O35516 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Notch2O35516 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.63■■□□□ 1.21
Notch2O35516 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.55■■□□□ 1.2
Notch2O35516 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Notch2O35516 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.52■■□□□ 1.2
Notch2O35516 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Notch2O35516 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Notch2O35516 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.49■■□□□ 1.19
Notch2O35516 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Notch2O35516 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Notch2O35516 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Notch2O35516 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Notch2O35516 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Notch2O35516 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Notch2O35516 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Notch2O35516 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Notch2O35516 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.39■■□□□ 1.17
Notch2O35516 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Notch2O35516 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Notch2O35516 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Notch2O35516 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Notch2O35516 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Notch2O35516 Gm45855-201ENSMUST00000212546 880 ntBASIC22.35■■□□□ 1.17
Notch2O35516 Gm16148-201ENSMUST00000119653 893 ntBASIC22.34■■□□□ 1.17
Notch2O35516 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Notch2O35516 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Notch2O35516 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Notch2O35516 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Notch2O35516 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.29■■□□□ 1.16
Notch2O35516 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Notch2O35516 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Notch2O35516 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Notch2O35516 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Notch2O35516 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Notch2O35516 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.24■■□□□ 1.15
Notch2O35516 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.24■■□□□ 1.15
Notch2O35516 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
Notch2O35516 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Notch2O35516 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Notch2O35516 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.2■■□□□ 1.14
Notch2O35516 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Notch2O35516 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Notch2O35516 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Notch2O35516 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
Notch2O35516 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Notch2O35516 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Notch2O35516 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Notch2O35516 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Notch2O35516 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Notch2O35516 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Notch2O35516 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.08■■□□□ 1.13
Notch2O35516 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Notch2O35516 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Notch2O35516 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Notch2O35516 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Notch2O35516 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Notch2O35516 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Notch2O35516 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22■■□□□ 1.11
Notch2O35516 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22■■□□□ 1.11
Notch2O35516 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Notch2O35516 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.99■■□□□ 1.11
Notch2O35516 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Notch2O35516 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Notch2O35516 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Notch2O35516 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Notch2O35516 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Notch2O35516 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.89■■□□□ 1.1
Notch2O35516 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.89■■□□□ 1.09
Notch2O35516 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Notch2O35516 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Notch2O35516 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Notch2O35516 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Notch2O35516 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Notch2O35516 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Notch2O35516 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Notch2O35516 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.79■■□□□ 1.08
Notch2O35516 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Notch2O35516 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Notch2O35516 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Notch2O35516 Gm15039-201ENSMUST00000118914 875 ntBASIC21.74■■□□□ 1.07
Notch2O35516 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Notch2O35516 Gm9397-201ENSMUST00000200125 605 ntBASIC21.73■■□□□ 1.07
Notch2O35516 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Notch2O35516 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Notch2O35516 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Notch2O35516 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Notch2O35516 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms