Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pkd1O08852 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pkd1O08852 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.6■□□□□ 0.57
Pkd1O08852 Zfp131-205ENSMUST00000223812 663 ntBASIC18.59■□□□□ 0.57
Pkd1O08852 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pkd1O08852 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pkd1O08852 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.51■□□□□ 0.55
Pkd1O08852 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pkd1O08852 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pkd1O08852 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pkd1O08852 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pkd1O08852 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pkd1O08852 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pkd1O08852 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pkd1O08852 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1O08852 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pkd1O08852 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pkd1O08852 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pkd1O08852 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pkd1O08852 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1O08852 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1O08852 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pkd1O08852 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.29■□□□□ 0.52
Pkd1O08852 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pkd1O08852 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pkd1O08852 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pkd1O08852 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Pkd1O08852 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pkd1O08852 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pkd1O08852 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pkd1O08852 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pkd1O08852 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.24■□□□□ 0.51
Pkd1O08852 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.24■□□□□ 0.51
Pkd1O08852 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pkd1O08852 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.22■□□□□ 0.51
Pkd1O08852 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pkd1O08852 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pkd1O08852 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pkd1O08852 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1O08852 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pkd1O08852 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pkd1O08852 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pkd1O08852 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pkd1O08852 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pkd1O08852 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pkd1O08852 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.06■□□□□ 0.48
Pkd1O08852 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.05■□□□□ 0.48
Pkd1O08852 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pkd1O08852 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.04■□□□□ 0.48
Pkd1O08852 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pkd1O08852 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pkd1O08852 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pkd1O08852 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pkd1O08852 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.01■□□□□ 0.47
Pkd1O08852 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18■□□□□ 0.47
Pkd1O08852 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pkd1O08852 Gm16148-201ENSMUST00000119653 893 ntBASIC17.99■□□□□ 0.47
Pkd1O08852 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pkd1O08852 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.97■□□□□ 0.47
Pkd1O08852 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pkd1O08852 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pkd1O08852 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pkd1O08852 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.92■□□□□ 0.46
Pkd1O08852 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.92■□□□□ 0.46
Pkd1O08852 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pkd1O08852 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.91■□□□□ 0.46
Pkd1O08852 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.89■□□□□ 0.46
Pkd1O08852 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Pkd1O08852 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pkd1O08852 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pkd1O08852 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pkd1O08852 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pkd1O08852 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pkd1O08852 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pkd1O08852 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pkd1O08852 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.85■□□□□ 0.45
Pkd1O08852 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.85■□□□□ 0.45
Pkd1O08852 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pkd1O08852 Gm45855-201ENSMUST00000212546 880 ntBASIC17.84■□□□□ 0.45
Pkd1O08852 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pkd1O08852 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1O08852 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.81■□□□□ 0.44
Pkd1O08852 Peli2-204ENSMUST00000226513 1320 ntBASIC17.8■□□□□ 0.44
Pkd1O08852 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1O08852 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.78■□□□□ 0.44
Pkd1O08852 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.77■□□□□ 0.44
Pkd1O08852 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pkd1O08852 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pkd1O08852 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pkd1O08852 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1O08852 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pkd1O08852 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pkd1O08852 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pkd1O08852 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pkd1O08852 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pkd1O08852 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pkd1O08852 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pkd1O08852 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pkd1O08852 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pkd1O08852 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms