Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.39□□□□□ -0.11
Rnf213E9Q555 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf213E9Q555 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf213E9Q555 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf213E9Q555 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf213E9Q555 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf213E9Q555 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC14.34□□□□□ -0.11
Rnf213E9Q555 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf213E9Q555 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf213E9Q555 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf213E9Q555 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf213E9Q555 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.29□□□□□ -0.12
Rnf213E9Q555 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf213E9Q555 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf213E9Q555 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf213E9Q555 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf213E9Q555 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf213E9Q555 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf213E9Q555 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf213E9Q555 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf213E9Q555 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf213E9Q555 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf213E9Q555 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf213E9Q555 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.14□□□□□ -0.15
Rnf213E9Q555 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf213E9Q555 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf213E9Q555 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf213E9Q555 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rnf213E9Q555 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf213E9Q555 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.11□□□□□ -0.15
Rnf213E9Q555 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf213E9Q555 AC166822.3-201ENSMUST00000227394 661 ntBASIC14.1□□□□□ -0.15
Rnf213E9Q555 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf213E9Q555 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rnf213E9Q555 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.03□□□□□ -0.16
Rnf213E9Q555 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf213E9Q555 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rnf213E9Q555 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC14.02□□□□□ -0.17
Rnf213E9Q555 Gm16148-201ENSMUST00000119653 893 ntBASIC14.01□□□□□ -0.17
Rnf213E9Q555 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf213E9Q555 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf213E9Q555 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rnf213E9Q555 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rnf213E9Q555 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf213E9Q555 Gm45855-201ENSMUST00000212546 880 ntBASIC13.97□□□□□ -0.17
Rnf213E9Q555 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf213E9Q555 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf213E9Q555 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC13.96□□□□□ -0.17
Rnf213E9Q555 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf213E9Q555 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Rnf213E9Q555 Psd-208ENSMUST00000224556 2034 ntBASIC13.94□□□□□ -0.18
Rnf213E9Q555 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf213E9Q555 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf213E9Q555 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf213E9Q555 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf213E9Q555 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf213E9Q555 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rnf213E9Q555 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf213E9Q555 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC13.89□□□□□ -0.19
Rnf213E9Q555 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rnf213E9Q555 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rnf213E9Q555 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rnf213E9Q555 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC13.89□□□□□ -0.19
Rnf213E9Q555 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf213E9Q555 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rnf213E9Q555 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf213E9Q555 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf213E9Q555 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf213E9Q555 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf213E9Q555 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf213E9Q555 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf213E9Q555 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf213E9Q555 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.84□□□□□ -0.19
Rnf213E9Q555 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rnf213E9Q555 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf213E9Q555 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf213E9Q555 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf213E9Q555 Gm9397-201ENSMUST00000200125 605 ntBASIC13.8□□□□□ -0.2
Rnf213E9Q555 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf213E9Q555 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf213E9Q555 AL845457.1-201ENSMUST00000197244 68 ntBASIC13.77□□□□□ -0.21
Rnf213E9Q555 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf213E9Q555 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf213E9Q555 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.76□□□□□ -0.21
Rnf213E9Q555 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf213E9Q555 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf213E9Q555 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.75□□□□□ -0.21
Rnf213E9Q555 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf213E9Q555 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC13.74□□□□□ -0.21
Rnf213E9Q555 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rnf213E9Q555 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf213E9Q555 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf213E9Q555 Peli2-204ENSMUST00000226513 1320 ntBASIC13.72□□□□□ -0.21
Rnf213E9Q555 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf213E9Q555 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf213E9Q555 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf213E9Q555 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf213E9Q555 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC13.67□□□□□ -0.22
Rnf213E9Q555 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC13.67□□□□□ -0.22
Rnf213E9Q555 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms