Protein–RNA interactions for Protein: A0A1C7CYV3

Zscan4-ps1, MCG113245, isoform CRA_a, mousemouse

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zscan4-ps1A0A1C7CYV3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.88■■■□□ 2.53
Zscan4-ps1A0A1C7CYV3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
Zscan4-ps1A0A1C7CYV3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Zscan4-ps1A0A1C7CYV3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.84■■■□□ 2.53
Zscan4-ps1A0A1C7CYV3 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.81■■■□□ 2.52
Zscan4-ps1A0A1C7CYV3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Zscan4-ps1A0A1C7CYV3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Zscan4-ps1A0A1C7CYV3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.76■■■□□ 2.51
Zscan4-ps1A0A1C7CYV3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Zscan4-ps1A0A1C7CYV3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Zscan4-ps1A0A1C7CYV3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Zscan4-ps1A0A1C7CYV3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Zscan4-ps1A0A1C7CYV3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Zscan4-ps1A0A1C7CYV3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Zscan4-ps1A0A1C7CYV3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Zscan4-ps1A0A1C7CYV3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Zscan4-ps1A0A1C7CYV3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Zscan4-ps1A0A1C7CYV3 Zfp131-205ENSMUST00000223812 663 ntBASIC30.58■■■□□ 2.49
Zscan4-ps1A0A1C7CYV3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Zscan4-ps1A0A1C7CYV3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Zscan4-ps1A0A1C7CYV3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Zscan4-ps1A0A1C7CYV3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Zscan4-ps1A0A1C7CYV3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Zscan4-ps1A0A1C7CYV3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Zscan4-ps1A0A1C7CYV3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Zscan4-ps1A0A1C7CYV3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Zscan4-ps1A0A1C7CYV3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.41■■■□□ 2.46
Zscan4-ps1A0A1C7CYV3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Zscan4-ps1A0A1C7CYV3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Zscan4-ps1A0A1C7CYV3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.37■■■□□ 2.45
Zscan4-ps1A0A1C7CYV3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.36■■■□□ 2.45
Zscan4-ps1A0A1C7CYV3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Zscan4-ps1A0A1C7CYV3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Zscan4-ps1A0A1C7CYV3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Zscan4-ps1A0A1C7CYV3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.28■■■□□ 2.44
Zscan4-ps1A0A1C7CYV3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Zscan4-ps1A0A1C7CYV3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Zscan4-ps1A0A1C7CYV3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Zscan4-ps1A0A1C7CYV3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Zscan4-ps1A0A1C7CYV3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.21■■■□□ 2.43
Zscan4-ps1A0A1C7CYV3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Zscan4-ps1A0A1C7CYV3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Zscan4-ps1A0A1C7CYV3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.18■■■□□ 2.42
Zscan4-ps1A0A1C7CYV3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Zscan4-ps1A0A1C7CYV3 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.08■■■□□ 2.41
Zscan4-ps1A0A1C7CYV3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Zscan4-ps1A0A1C7CYV3 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.03■■■□□ 2.4
Zscan4-ps1A0A1C7CYV3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Zscan4-ps1A0A1C7CYV3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Zscan4-ps1A0A1C7CYV3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Zscan4-ps1A0A1C7CYV3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Zscan4-ps1A0A1C7CYV3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Zscan4-ps1A0A1C7CYV3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Zscan4-ps1A0A1C7CYV3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Zscan4-ps1A0A1C7CYV3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.91■■■□□ 2.38
Zscan4-ps1A0A1C7CYV3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Zscan4-ps1A0A1C7CYV3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Zscan4-ps1A0A1C7CYV3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Zscan4-ps1A0A1C7CYV3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Zscan4-ps1A0A1C7CYV3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Zscan4-ps1A0A1C7CYV3 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.77■■■□□ 2.36
Zscan4-ps1A0A1C7CYV3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.74■■■□□ 2.35
Zscan4-ps1A0A1C7CYV3 Gm16148-201ENSMUST00000119653 893 ntBASIC29.72■■■□□ 2.35
Zscan4-ps1A0A1C7CYV3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Zscan4-ps1A0A1C7CYV3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Zscan4-ps1A0A1C7CYV3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Zscan4-ps1A0A1C7CYV3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.64■■■□□ 2.34
Zscan4-ps1A0A1C7CYV3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.62■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.59■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.59■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.58■■■□□ 2.33
Zscan4-ps1A0A1C7CYV3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Zscan4-ps1A0A1C7CYV3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Zscan4-ps1A0A1C7CYV3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Zscan4-ps1A0A1C7CYV3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
Zscan4-ps1A0A1C7CYV3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
Zscan4-ps1A0A1C7CYV3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Zscan4-ps1A0A1C7CYV3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Zscan4-ps1A0A1C7CYV3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Zscan4-ps1A0A1C7CYV3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Zscan4-ps1A0A1C7CYV3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Zscan4-ps1A0A1C7CYV3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Zscan4-ps1A0A1C7CYV3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.42■■■□□ 2.3
Zscan4-ps1A0A1C7CYV3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Zscan4-ps1A0A1C7CYV3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Zscan4-ps1A0A1C7CYV3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Zscan4-ps1A0A1C7CYV3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.37■■■□□ 2.29
Zscan4-ps1A0A1C7CYV3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Zscan4-ps1A0A1C7CYV3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Zscan4-ps1A0A1C7CYV3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.33■■■□□ 2.29
Zscan4-ps1A0A1C7CYV3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Zscan4-ps1A0A1C7CYV3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms