Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 IES1YFL013C 2079 nt8.45□□□□□ -1.06
RKR1Q04781 PRP24YMR268C 1335 nt8.44□□□□□ -1.06
RKR1Q04781 MGR2YPL098C 342 nt8.44□□□□□ -1.06
RKR1Q04781 STL1YDR536W 1710 nt8.44□□□□□ -1.06
RKR1Q04781 WTM1YOR230W 1314 nt8.44□□□□□ -1.06
RKR1Q04781 MTQ1YNL063W 945 nt8.44□□□□□ -1.06
RKR1Q04781 MID1YNL291C 1647 nt8.43□□□□□ -1.06
RKR1Q04781 VAM7YGL212W 951 nt8.43□□□□□ -1.06
RKR1Q04781 SCW4YGR279C 1161 nt8.42□□□□□ -1.06
RKR1Q04781 BGL2YGR282C 942 nt8.42□□□□□ -1.06
RKR1Q04781 YPR123CYPR123C 435 nt8.42□□□□□ -1.06
RKR1Q04781 GEP3YOR205C 1671 nt8.42□□□□□ -1.06
RKR1Q04781 ROX3YBL093C 663 nt8.41□□□□□ -1.06
RKR1Q04781 SCO2YBR024W 906 nt8.41□□□□□ -1.06
RKR1Q04781 OAZ1YPL052W 879 nt8.41□□□□□ -1.06
RKR1Q04781 GTB1YDR221W 2109 nt8.41□□□□□ -1.06
RKR1Q04781 PXR1YGR280C 816 nt8.4□□□□□ -1.06
RKR1Q04781 RPN7YPR108W 1290 nt8.4□□□□□ -1.06
RKR1Q04781 ISC1YER019W 1434 nt8.39□□□□□ -1.07
RKR1Q04781 SNZ3YFL059W 897 nt8.39□□□□□ -1.07
RKR1Q04781 SNZ2YNL333W 897 nt8.39□□□□□ -1.07
RKR1Q04781 FEX1YOR390W 1128 nt8.39□□□□□ -1.07
RKR1Q04781 FEX2YPL279C 1128 nt8.39□□□□□ -1.07
RKR1Q04781 YAP1YML007W 1953 nt8.38□□□□□ -1.07
RKR1Q04781 YRF1-4YLR466W 4149 nt8.38□□□□□ -1.07
RKR1Q04781 YIL060WYIL060W 435 nt8.38□□□□□ -1.07
RKR1Q04781 RPP0YLR340W 939 nt8.38□□□□□ -1.07
RKR1Q04781 BAP2YBR068C 1830 nt8.38□□□□□ -1.07
RKR1Q04781 CAB4YGR277C 918 nt8.37□□□□□ -1.07
RKR1Q04781 DFG5YMR238W 1377 nt8.37□□□□□ -1.07
RKR1Q04781 MEU1YLR017W 1014 nt8.36□□□□□ -1.07
RKR1Q04781 FET3YMR058W 1911 nt8.36□□□□□ -1.07
RKR1Q04781 UTP7YER082C 1665 nt8.36□□□□□ -1.07
RKR1Q04781 MSH1YHR120W 2880 nt8.35□□□□□ -1.07
RKR1Q04781 COQ6YGR255C 1440 nt8.35□□□□□ -1.07
RKR1Q04781 NUP116YMR047C 3342 nt8.35□□□□□ -1.07
RKR1Q04781 GWT1YJL091C 1473 nt8.35□□□□□ -1.07
RKR1Q04781 CAM1YPL048W 1248 nt8.35□□□□□ -1.07
RKR1Q04781 NOP8YOL144W 1455 nt8.34□□□□□ -1.07
RKR1Q04781 GYP1YOR070C 1914 nt8.33□□□□□ -1.08
RKR1Q04781 MRS1YIR021W 1092 nt8.33□□□□□ -1.08
RKR1Q04781 OAC1YKL120W 975 nt8.33□□□□□ -1.08
RKR1Q04781 PYC1YGL062W 3537 nt8.33□□□□□ -1.08
RKR1Q04781 CTF3YLR381W 2202 nt8.33□□□□□ -1.08
RKR1Q04781 SCT1YBL011W 2280 nt8.33□□□□□ -1.08
RKR1Q04781 HSF1YGL073W 2502 nt8.31□□□□□ -1.08
RKR1Q04781 TOM5YPR133W-A 153 nt8.31□□□□□ -1.08
RKR1Q04781 SKN1YGR143W 2316 nt8.31□□□□□ -1.08
RKR1Q04781 TUB2YFL037W 1374 nt8.3□□□□□ -1.08
RKR1Q04781 MTQ2YDR140W 666 nt8.3□□□□□ -1.08
RKR1Q04781 YJL171CYJL171C 1191 nt8.3□□□□□ -1.08
RKR1Q04781 MVD1YNR043W 1191 nt8.3□□□□□ -1.08
RKR1Q04781 DIT2YDR402C 1470 nt8.29□□□□□ -1.08
RKR1Q04781 ARN1YHL040C 1884 nt8.28□□□□□ -1.08
RKR1Q04781 MNN10YDR245W 1182 nt8.28□□□□□ -1.08
RKR1Q04781 FRT1YOR324C 1809 nt8.28□□□□□ -1.08
RKR1Q04781 VPS4YPR173C 1314 nt8.27□□□□□ -1.09
RKR1Q04781 PRP31YGR091W 1485 nt8.27□□□□□ -1.09
RKR1Q04781 YDR053WYDR053W 396 nt8.27□□□□□ -1.09
RKR1Q04781 IMA5YJL216C 1746 nt8.26□□□□□ -1.09
RKR1Q04781 QDR3YBR043C 2070 nt8.26□□□□□ -1.09
RKR1Q04781 TAF10YDR167W 621 nt8.26□□□□□ -1.09
RKR1Q04781 HEM14YER014W 1620 nt8.26□□□□□ -1.09
RKR1Q04781 ACF2YLR144C 2340 nt8.25□□□□□ -1.09
RKR1Q04781 YHR214WYHR214W 612 nt8.25□□□□□ -1.09
RKR1Q04781 YIL171W-AYIL171W-A 453 nt8.25□□□□□ -1.09
RKR1Q04781 YJL220WYJL220W 453 nt8.25□□□□□ -1.09
RKR1Q04781 YAR066WYAR066W 612 nt8.25□□□□□ -1.09
RKR1Q04781 GPT2YKR067W 2232 nt8.25□□□□□ -1.09
RKR1Q04781 GAL2YLR081W 1725 nt8.25□□□□□ -1.09
RKR1Q04781 MRC1YCL061C 3291 nt8.24□□□□□ -1.09
RKR1Q04781 LYS5YGL154C 819 nt8.24□□□□□ -1.09
RKR1Q04781 YNL040WYNL040W 1371 nt8.23□□□□□ -1.09
RKR1Q04781 SCM3YDL139C 672 nt8.22□□□□□ -1.09
RKR1Q04781 LCP5YER127W 1074 nt8.22□□□□□ -1.09
RKR1Q04781 DRN1YGR093W 1524 nt8.21□□□□□ -1.1
RKR1Q04781 NHP6AYPR052C 282 nt8.21□□□□□ -1.1
RKR1Q04781 DCC1YCL016C 1143 nt8.2□□□□□ -1.1
RKR1Q04781 HRP1YOL123W 1605 nt8.19□□□□□ -1.1
RKR1Q04781 TIF5YPR041W 1218 nt8.19□□□□□ -1.1
RKR1Q04781 CDC13YDL220C 2775 nt8.17□□□□□ -1.1
RKR1Q04781 YDR541CYDR541C 1035 nt8.17□□□□□ -1.1
RKR1Q04781 PEP4YPL154C 1218 nt8.17□□□□□ -1.1
RKR1Q04781 JEM1YJL073W 1938 nt8.17□□□□□ -1.1
RKR1Q04781 FPR2YDR519W 408 nt8.16□□□□□ -1.1
RKR1Q04781 SEH1YGL100W 1050 nt8.16□□□□□ -1.1
RKR1Q04781 MRM2YGL136C 963 nt8.16□□□□□ -1.1
RKR1Q04781 ULA1YPL003W 1389 nt8.16□□□□□ -1.1
RKR1Q04781 PAT1YCR077C 2391 nt8.16□□□□□ -1.1
RKR1Q04781 ENT2YLR206W 1842 nt8.16□□□□□ -1.1
RKR1Q04781 RSP5YER125W 2430 nt8.15□□□□□ -1.1
RKR1Q04781 THI4YGR144W 981 nt8.14□□□□□ -1.11
RKR1Q04781 YML6YML025C 861 nt8.14□□□□□ -1.11
RKR1Q04781 ATP1YBL099W 1638 nt8.14□□□□□ -1.11
RKR1Q04781 GUA1YMR217W 1578 nt8.14□□□□□ -1.11
RKR1Q04781 AIM10YER087W 1731 nt8.14□□□□□ -1.11
RKR1Q04781 SLC1YDL052C 912 nt8.14□□□□□ -1.11
RKR1Q04781 TRP5YGL026C 2124 nt8.14□□□□□ -1.11
RKR1Q04781 VPS29YHR012W 849 nt8.14□□□□□ -1.11
RKR1Q04781 YLR317WYLR317W 435 nt8.13□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 54.9 ms