Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmg20aQ9DC33 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Hmg20aQ9DC33 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmg20aQ9DC33 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmg20aQ9DC33 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmg20aQ9DC33 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
Hmg20aQ9DC33 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hmg20aQ9DC33 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmg20aQ9DC33 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmg20aQ9DC33 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmg20aQ9DC33 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Hmg20aQ9DC33 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hmg20aQ9DC33 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Hmg20aQ9DC33 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hmg20aQ9DC33 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hmg20aQ9DC33 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hmg20aQ9DC33 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmg20aQ9DC33 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Hmg20aQ9DC33 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hmg20aQ9DC33 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmg20aQ9DC33 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hmg20aQ9DC33 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmg20aQ9DC33 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hmg20aQ9DC33 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.48■□□□□ 0.71
Hmg20aQ9DC33 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20aQ9DC33 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hmg20aQ9DC33 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20aQ9DC33 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.47■□□□□ 0.71
Hmg20aQ9DC33 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20aQ9DC33 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.47■□□□□ 0.71
Hmg20aQ9DC33 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20aQ9DC33 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmg20aQ9DC33 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20aQ9DC33 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20aQ9DC33 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20aQ9DC33 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20aQ9DC33 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20aQ9DC33 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20aQ9DC33 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmg20aQ9DC33 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.46■□□□□ 0.71
Hmg20aQ9DC33 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Hmg20aQ9DC33 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmg20aQ9DC33 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Hmg20aQ9DC33 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.44■□□□□ 0.7
Hmg20aQ9DC33 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20aQ9DC33 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20aQ9DC33 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20aQ9DC33 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20aQ9DC33 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20aQ9DC33 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmg20aQ9DC33 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmg20aQ9DC33 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.42■□□□□ 0.7
Hmg20aQ9DC33 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hmg20aQ9DC33 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20aQ9DC33 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20aQ9DC33 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hmg20aQ9DC33 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmg20aQ9DC33 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms