Protein–RNA interactions for Protein: Q06336

GGA1, ADP-ribosylation factor-binding protein GGA1, yeastyeast

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GGA1Q06336 SUP2tY(GUA)D 75 nt5.9□□□□□ -1.46
GGA1Q06336 SUP11tY(GUA)F1 75 nt5.9□□□□□ -1.46
GGA1Q06336 SUP6tY(GUA)F2 75 nt5.9□□□□□ -1.46
GGA1Q06336 SUP7tY(GUA)J1 75 nt5.9□□□□□ -1.46
GGA1Q06336 SUP4tY(GUA)J2 75 nt5.9□□□□□ -1.46
GGA1Q06336 SUP5tY(GUA)M1 75 nt5.9□□□□□ -1.46
GGA1Q06336 SUP8tY(GUA)M2 75 nt5.9□□□□□ -1.46
GGA1Q06336 SUP3tY(GUA)O 75 nt5.9□□□□□ -1.46
GGA1Q06336 TSA1YML028W 591 nt5.9□□□□□ -1.46
GGA1Q06336 NHP6BYBR089C-A 300 nt5.9□□□□□ -1.46
GGA1Q06336 SGF29YCL010C 780 nt5.9□□□□□ -1.46
GGA1Q06336 MCM3YEL032W 2916 nt5.9□□□□□ -1.47
GGA1Q06336 ERG1YGR175C 1491 nt5.9□□□□□ -1.47
GGA1Q06336 SIP5YMR140W 1470 nt5.9□□□□□ -1.47
GGA1Q06336 PKC1YBL105C 3456 nt5.89□□□□□ -1.47
GGA1Q06336 RPL7AYGL076C 735 nt5.89□□□□□ -1.47
GGA1Q06336 YKL153WYKL153W 510 nt5.89□□□□□ -1.47
GGA1Q06336 YHM2YMR241W 945 nt5.89□□□□□ -1.47
GGA1Q06336 RPL7BYPL198W 735 nt5.89□□□□□ -1.47
GGA1Q06336 IME2YJL106W 1938 nt5.89□□□□□ -1.47
GGA1Q06336 FRS2YFL022C 1512 nt5.89□□□□□ -1.47
GGA1Q06336 SNZ3YFL059W 897 nt5.88□□□□□ -1.47
GGA1Q06336 LDS1YAL018C 978 nt5.88□□□□□ -1.47
GGA1Q06336 MDY2YOL111C 639 nt5.88□□□□□ -1.47
GGA1Q06336 ERI1YPL096C-A 207 nt5.88□□□□□ -1.47
GGA1Q06336 RPO26YPR187W 468 nt5.88□□□□□ -1.47
GGA1Q06336 BNA5YLR231C 1362 nt5.88□□□□□ -1.47
GGA1Q06336 RPL10YLR075W 666 nt5.87□□□□□ -1.47
GGA1Q06336 RVB2YPL235W 1416 nt5.86□□□□□ -1.47
GGA1Q06336 RPN11YFR004W 921 nt5.86□□□□□ -1.47
GGA1Q06336 CTR2YHR175W 570 nt5.86□□□□□ -1.47
GGA1Q06336 YNR040WYNR040W 771 nt5.86□□□□□ -1.47
GGA1Q06336 CRF1YDR223W 1404 nt5.85□□□□□ -1.47
GGA1Q06336 tR(ACG)DtR(ACG)D 73 nt5.85□□□□□ -1.47
GGA1Q06336 tR(ACG)EtR(ACG)E 73 nt5.85□□□□□ -1.47
GGA1Q06336 tR(ACG)KtR(ACG)K 73 nt5.85□□□□□ -1.47
GGA1Q06336 tR(ACG)LtR(ACG)L 73 nt5.85□□□□□ -1.47
GGA1Q06336 tR(ACG)OtR(ACG)O 73 nt5.85□□□□□ -1.47
GGA1Q06336 ARP1YHR129C 1155 nt5.85□□□□□ -1.47
GGA1Q06336 MPC2YHR162W 390 nt5.85□□□□□ -1.47
GGA1Q06336 YJU3YKL094W 942 nt5.85□□□□□ -1.47
GGA1Q06336 SEC39YLR440C 2130 nt5.85□□□□□ -1.47
GGA1Q06336 HAP3YBL021C 435 nt5.85□□□□□ -1.47
GGA1Q06336 RPN7YPR108W 1290 nt5.85□□□□□ -1.47
GGA1Q06336 YEL068CYEL068C 333 nt5.84□□□□□ -1.47
GGA1Q06336 CUP2YGL166W 678 nt5.84□□□□□ -1.47
GGA1Q06336 YPR114WYPR114W 948 nt5.84□□□□□ -1.47
GGA1Q06336 PSE1YMR308C 3270 nt5.84□□□□□ -1.47
GGA1Q06336 SSK22YCR073C 3996 nt5.84□□□□□ -1.47
GGA1Q06336 YMR155WYMR155W 1644 nt5.84□□□□□ -1.47
GGA1Q06336 YET3YDL072C 612 nt5.83□□□□□ -1.48
GGA1Q06336 CDC34YDR054C 888 nt5.83□□□□□ -1.48
GGA1Q06336 YDR187CYDR187C 519 nt5.83□□□□□ -1.48
GGA1Q06336 YNL017CYNL017C 339 nt5.83□□□□□ -1.48
GGA1Q06336 DPH2YKL191W 1605 nt5.83□□□□□ -1.48
GGA1Q06336 PIF1YML061C 2580 nt5.83□□□□□ -1.48
GGA1Q06336 YME1YPR024W 2244 nt5.83□□□□□ -1.48
GGA1Q06336 TRP3YKL211C 1455 nt5.83□□□□□ -1.48
GGA1Q06336 HSP78YDR258C 2436 nt5.83□□□□□ -1.48
GGA1Q06336 CLB1YGR108W 1416 nt5.82□□□□□ -1.48
GGA1Q06336 YPR196WYPR196W 1413 nt5.82□□□□□ -1.48
GGA1Q06336 YER186CYER186C 921 nt5.82□□□□□ -1.48
GGA1Q06336 TAL1YLR354C 1008 nt5.82□□□□□ -1.48
GGA1Q06336 MRPS16YPL013C 366 nt5.82□□□□□ -1.48
GGA1Q06336 VPS24YKL041W 675 nt5.81□□□□□ -1.48
GGA1Q06336 YLR361C-AYLR361C-A 297 nt5.81□□□□□ -1.48
GGA1Q06336 SCS7YMR272C 1155 nt5.81□□□□□ -1.48
GGA1Q06336 NSI1YDR026C 1713 nt5.81□□□□□ -1.48
GGA1Q06336 ATG4YNL223W 1485 nt5.81□□□□□ -1.48
GGA1Q06336 RAD3YER171W 2337 nt5.81□□□□□ -1.48
GGA1Q06336 DRS1YLL008W 2259 nt5.81□□□□□ -1.48
GGA1Q06336 SIT1YEL065W 1887 nt5.8□□□□□ -1.48
GGA1Q06336 SIT4YDL047W 936 nt5.8□□□□□ -1.48
GGA1Q06336 PEX19YDL065C 1029 nt5.8□□□□□ -1.48
GGA1Q06336 YDR034W-BYDR034W-B 156 nt5.8□□□□□ -1.48
GGA1Q06336 YER148W-AYER148W-A 579 nt5.8□□□□□ -1.48
GGA1Q06336 HAP2YGL237C 798 nt5.8□□□□□ -1.48
GGA1Q06336 RRP46YGR095C 672 nt5.8□□□□□ -1.48
GGA1Q06336 EEB1YPL095C 1371 nt5.8□□□□□ -1.48
GGA1Q06336 MDM31YHR194W 1740 nt5.79□□□□□ -1.48
GGA1Q06336 ARN2YHL047C 1863 nt5.79□□□□□ -1.48
GGA1Q06336 MAK31YCR020C-A 267 nt5.79□□□□□ -1.48
GGA1Q06336 COX11YPL132W 903 nt5.79□□□□□ -1.48
GGA1Q06336 ADE13YLR359W 1449 nt5.79□□□□□ -1.48
GGA1Q06336 WTM2YOR229W 1404 nt5.79□□□□□ -1.48
GGA1Q06336 MET7YOR241W 1647 nt5.78□□□□□ -1.48
GGA1Q06336 PDR18YNR070W 4002 nt5.78□□□□□ -1.48
GGA1Q06336 NCS6YGL211W 1080 nt5.78□□□□□ -1.48
GGA1Q06336 PHB1YGR132C 864 nt5.78□□□□□ -1.48
GGA1Q06336 CAF40YNL288W 1122 nt5.78□□□□□ -1.48
GGA1Q06336 PPG1YNR032W 1107 nt5.78□□□□□ -1.48
GGA1Q06336 YOL131WYOL131W 327 nt5.78□□□□□ -1.48
GGA1Q06336 FSF1YOR271C 984 nt5.78□□□□□ -1.48
GGA1Q06336 OSW2YLR054C 2175 nt5.77□□□□□ -1.49
GGA1Q06336 STE20YHL007C 2820 nt5.77□□□□□ -1.49
GGA1Q06336 CHO1YER026C 831 nt5.77□□□□□ -1.49
GGA1Q06336 TBF1YPL128C 1689 nt5.77□□□□□ -1.49
GGA1Q06336 YPK2YMR104C 2034 nt5.77□□□□□ -1.49
GGA1Q06336 CDC16YKL022C 2523 nt5.77□□□□□ -1.49
GGA1Q06336 ASK10YGR097W 3441 nt5.77□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 52.2 ms