Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 QNS1YHR074W 2145 nt5.17□□□□□ -1.58
CUP9P41817 CSC1YLR241W 2349 nt5.17□□□□□ -1.58
CUP9P41817 YPK2YMR104C 2034 nt5.16□□□□□ -1.58
CUP9P41817 MPA43YNL249C 1629 nt5.16□□□□□ -1.58
CUP9P41817 ORC5YNL261W 1440 nt5.16□□□□□ -1.58
CUP9P41817 NPA3YJR072C 1158 nt5.16□□□□□ -1.58
CUP9P41817 YJU3YKL094W 942 nt5.16□□□□□ -1.58
CUP9P41817 LDB19YOR322C 2457 nt5.16□□□□□ -1.58
CUP9P41817 VHT1YGR065C 1782 nt5.15□□□□□ -1.58
CUP9P41817 YFL064CYFL064C 525 nt5.15□□□□□ -1.59
CUP9P41817 MLC1YGL106W 450 nt5.15□□□□□ -1.59
CUP9P41817 PGU1YJR153W 1086 nt5.15□□□□□ -1.59
CUP9P41817 OAC1YKL120W 975 nt5.15□□□□□ -1.59
CUP9P41817 YPR202WYPR202W 717 nt5.15□□□□□ -1.59
CUP9P41817 ACC1YNR016C 6702 nt5.15□□□□□ -1.59
CUP9P41817 PRP46YPL151C 1356 nt5.15□□□□□ -1.59
CUP9P41817 YME1YPR024W 2244 nt5.15□□□□□ -1.59
CUP9P41817 RME1YGR044C 903 nt5.14□□□□□ -1.59
CUP9P41817 DAL82YNL314W 768 nt5.14□□□□□ -1.59
CUP9P41817 VPS5YOR069W 2028 nt5.14□□□□□ -1.59
CUP9P41817 YER010CYER010C 705 nt5.13□□□□□ -1.59
CUP9P41817 YER186CYER186C 921 nt5.13□□□□□ -1.59
CUP9P41817 YGR176WYGR176W 348 nt5.13□□□□□ -1.59
CUP9P41817 CSG2YBR036C 1233 nt5.13□□□□□ -1.59
CUP9P41817 YML082WYML082W 1950 nt5.13□□□□□ -1.59
CUP9P41817 YKR023WYKR023W 1593 nt5.12□□□□□ -1.59
CUP9P41817 HIS7YBR248C 1659 nt5.12□□□□□ -1.59
CUP9P41817 RPS2YGL123W 765 nt5.12□□□□□ -1.59
CUP9P41817 STM1YLR150W 822 nt5.12□□□□□ -1.59
CUP9P41817 CAR1YPL111W 1002 nt5.12□□□□□ -1.59
CUP9P41817 VPS4YPR173C 1314 nt5.12□□□□□ -1.59
CUP9P41817 DIA3YDL024C 1407 nt5.12□□□□□ -1.59
CUP9P41817 YCR097W-AYCR097W-A 267 nt5.11□□□□□ -1.59
CUP9P41817 ATO3YDR384C 828 nt5.11□□□□□ -1.59
CUP9P41817 KSS1YGR040W 1107 nt5.11□□□□□ -1.59
CUP9P41817 YIL077CYIL077C 963 nt5.11□□□□□ -1.59
CUP9P41817 PIN2YOR104W 849 nt5.11□□□□□ -1.59
CUP9P41817 YMR155WYMR155W 1644 nt5.11□□□□□ -1.59
CUP9P41817 VMA16YHR026W 642 nt5.1□□□□□ -1.59
CUP9P41817 YAP1801YHR161C 1914 nt5.1□□□□□ -1.59
CUP9P41817 YHC3YJL059W 1227 nt5.1□□□□□ -1.59
CUP9P41817 TFS1YLR178C 660 nt5.1□□□□□ -1.59
CUP9P41817 YLR194CYLR194C 765 nt5.1□□□□□ -1.59
CUP9P41817 RTT106YNL206C 1368 nt5.1□□□□□ -1.59
CUP9P41817 YOR300WYOR300W 309 nt5.1□□□□□ -1.59
CUP9P41817 VMA4YOR332W 702 nt5.1□□□□□ -1.59
CUP9P41817 TEA1YOR337W 2280 nt5.1□□□□□ -1.59
CUP9P41817 SGV1YPR161C 1974 nt5.1□□□□□ -1.59
CUP9P41817 MLC2YPR188C 492 nt5.1□□□□□ -1.59
CUP9P41817 NUD1YOR373W 2556 nt5.1□□□□□ -1.59
CUP9P41817 ATG22YCL038C 1587 nt5.09□□□□□ -1.59
CUP9P41817 KNH1YDL049C 807 nt5.09□□□□□ -1.59
CUP9P41817 SEC20YDR498C 1152 nt5.09□□□□□ -1.59
CUP9P41817 YER148W-AYER148W-A 579 nt5.09□□□□□ -1.59
CUP9P41817 HSX1tR(CCU)J 72 nt5.09□□□□□ -1.59
CUP9P41817 GAT4YIR013C 366 nt5.09□□□□□ -1.59
CUP9P41817 HCR1YLR192C 798 nt5.09□□□□□ -1.59
CUP9P41817 SCO2YBR024W 906 nt5.09□□□□□ -1.59
CUP9P41817 YFL042CYFL042C 2025 nt5.09□□□□□ -1.6
CUP9P41817 XBP1YIL101C 1944 nt5.09□□□□□ -1.6
CUP9P41817 VNX1YNL321W 2727 nt5.09□□□□□ -1.6
CUP9P41817 HXT17YNR072W 1695 nt5.08□□□□□ -1.6
CUP9P41817 RSA4YCR072C 1548 nt5.08□□□□□ -1.6
CUP9P41817 ADE13YLR359W 1449 nt5.08□□□□□ -1.6
CUP9P41817 YGL036WYGL036W 2730 nt5.08□□□□□ -1.6
CUP9P41817 YDL057WYDL057W 987 nt5.08□□□□□ -1.6
CUP9P41817 RPL7AYGL076C 735 nt5.08□□□□□ -1.6
CUP9P41817 YJR115WYJR115W 510 nt5.08□□□□□ -1.6
CUP9P41817 YLR118CYLR118C 684 nt5.08□□□□□ -1.6
CUP9P41817 PNP1YLR209C 936 nt5.08□□□□□ -1.6
CUP9P41817 RPL7BYPL198W 735 nt5.08□□□□□ -1.6
CUP9P41817 HSP78YDR258C 2436 nt5.08□□□□□ -1.6
CUP9P41817 ERC1YHR032W 1746 nt5.08□□□□□ -1.6
CUP9P41817 KTR5YNL029C 1569 nt5.08□□□□□ -1.6
CUP9P41817 HIR1YBL008W 2523 nt5.07□□□□□ -1.6
CUP9P41817 COX26YDR119W-A 201 nt5.07□□□□□ -1.6
CUP9P41817 YGR182CYGR182C 354 nt5.07□□□□□ -1.6
CUP9P41817 MRPL13YKR006C 795 nt5.07□□□□□ -1.6
CUP9P41817 YBR230W-AYBR230W-A 201 nt5.07□□□□□ -1.6
CUP9P41817 YEL020CYEL020C 1683 nt5.07□□□□□ -1.6
CUP9P41817 KEL1YHR158C 3495 nt5.07□□□□□ -1.6
CUP9P41817 ESC8YOL017W 2145 nt5.06□□□□□ -1.6
CUP9P41817 PYC1YGL062W 3537 nt5.06□□□□□ -1.6
CUP9P41817 LDB18YLL049W 540 nt5.06□□□□□ -1.6
CUP9P41817 ERI1YPL096C-A 207 nt5.06□□□□□ -1.6
CUP9P41817 GAT1YFL021W 1533 nt5.06□□□□□ -1.6
CUP9P41817 TIM54YJL054W 1437 nt5.06□□□□□ -1.6
CUP9P41817 VTH1YIL173W 4650 nt5.05□□□□□ -1.6
CUP9P41817 VTH2YJL222W 4650 nt5.05□□□□□ -1.6
CUP9P41817 CAD1YDR423C 1230 nt5.05□□□□□ -1.6
CUP9P41817 SNZ3YFL059W 897 nt5.05□□□□□ -1.6
CUP9P41817 SEC13YLR208W 894 nt5.05□□□□□ -1.6
CUP9P41817 TAL1YLR354C 1008 nt5.05□□□□□ -1.6
CUP9P41817 SNZ2YNL333W 897 nt5.05□□□□□ -1.6
CUP9P41817 HSP26YBR072W 645 nt5.05□□□□□ -1.6
CUP9P41817 MRC1YCL061C 3291 nt5.05□□□□□ -1.6
CUP9P41817 PAT1YCR077C 2391 nt5.05□□□□□ -1.6
CUP9P41817 SOG2YOR353C 2376 nt5.04□□□□□ -1.6
CUP9P41817 YKL151CYKL151C 1014 nt5.04□□□□□ -1.6
CUP9P41817 YLL059CYLL059C 507 nt5.04□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 86 ms