Protein–RNA interactions for Protein: E9Q7P2

Cacna1i, Voltage-dependent T-type calcium channel subunit alpha, mousemouse

Predictions only

Length 2,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1iE9Q7P2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1iE9Q7P2 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.79■□□□□ 0.44
Cacna1iE9Q7P2 Gm45444-201ENSMUST00000211394 898 ntBASIC17.79■□□□□ 0.44
Cacna1iE9Q7P2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1iE9Q7P2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1iE9Q7P2 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cacna1iE9Q7P2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1iE9Q7P2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1iE9Q7P2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cacna1iE9Q7P2 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.78■□□□□ 0.44
Cacna1iE9Q7P2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cacna1iE9Q7P2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cacna1iE9Q7P2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cacna1iE9Q7P2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.77■□□□□ 0.44
Cacna1iE9Q7P2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1iE9Q7P2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1iE9Q7P2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cacna1iE9Q7P2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.77■□□□□ 0.43
Cacna1iE9Q7P2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.77■□□□□ 0.43
Cacna1iE9Q7P2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cacna1iE9Q7P2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Cacna1iE9Q7P2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1iE9Q7P2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1iE9Q7P2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.76■□□□□ 0.43
Cacna1iE9Q7P2 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.76■□□□□ 0.43
Cacna1iE9Q7P2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1iE9Q7P2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1iE9Q7P2 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.76■□□□□ 0.43
Cacna1iE9Q7P2 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.76■□□□□ 0.43
Cacna1iE9Q7P2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cacna1iE9Q7P2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1iE9Q7P2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1iE9Q7P2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1iE9Q7P2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1iE9Q7P2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.75■□□□□ 0.43
Cacna1iE9Q7P2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1iE9Q7P2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cacna1iE9Q7P2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1iE9Q7P2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cacna1iE9Q7P2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1iE9Q7P2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1iE9Q7P2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1iE9Q7P2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cacna1iE9Q7P2 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.73■□□□□ 0.43
Cacna1iE9Q7P2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1iE9Q7P2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1iE9Q7P2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1iE9Q7P2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cacna1iE9Q7P2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1iE9Q7P2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1iE9Q7P2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1iE9Q7P2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Cacna1iE9Q7P2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cacna1iE9Q7P2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1iE9Q7P2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1iE9Q7P2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1iE9Q7P2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cacna1iE9Q7P2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cacna1iE9Q7P2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.7■□□□□ 0.42
Cacna1iE9Q7P2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1iE9Q7P2 Gm44428-201ENSMUST00000204474 874 ntBASIC17.7■□□□□ 0.42
Cacna1iE9Q7P2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.69■□□□□ 0.42
Cacna1iE9Q7P2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1iE9Q7P2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1iE9Q7P2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1iE9Q7P2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1iE9Q7P2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1iE9Q7P2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1iE9Q7P2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.68■□□□□ 0.42
Cacna1iE9Q7P2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.68■□□□□ 0.42
Cacna1iE9Q7P2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1iE9Q7P2 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.67■□□□□ 0.42
Cacna1iE9Q7P2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1iE9Q7P2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1iE9Q7P2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cacna1iE9Q7P2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1iE9Q7P2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1iE9Q7P2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms