Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CcnkO88874 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.01■□□□□ 0.63
CcnkO88874 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CcnkO88874 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CcnkO88874 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CcnkO88874 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19■□□□□ 0.63
CcnkO88874 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CcnkO88874 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CcnkO88874 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19■□□□□ 0.63
CcnkO88874 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19■□□□□ 0.63
CcnkO88874 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CcnkO88874 Gm10616-201ENSMUST00000205285 2127 ntBASIC19■□□□□ 0.63
CcnkO88874 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19■□□□□ 0.63
CcnkO88874 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19■□□□□ 0.63
CcnkO88874 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
CcnkO88874 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcnkO88874 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcnkO88874 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcnkO88874 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CcnkO88874 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcnkO88874 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CcnkO88874 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CcnkO88874 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.97■□□□□ 0.63
CcnkO88874 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CcnkO88874 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CcnkO88874 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CcnkO88874 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CcnkO88874 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CcnkO88874 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.95■□□□□ 0.62
CcnkO88874 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CcnkO88874 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CcnkO88874 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.95■□□□□ 0.62
CcnkO88874 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.95■□□□□ 0.62
CcnkO88874 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
CcnkO88874 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CcnkO88874 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CcnkO88874 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CcnkO88874 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CcnkO88874 Terc-201ENSMUST00000082862 423 ntBASIC18.94■□□□□ 0.62
CcnkO88874 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CcnkO88874 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CcnkO88874 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CcnkO88874 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CcnkO88874 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CcnkO88874 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.93■□□□□ 0.62
CcnkO88874 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CcnkO88874 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CcnkO88874 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.92■□□□□ 0.62
CcnkO88874 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CcnkO88874 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CcnkO88874 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CcnkO88874 Iqck-206ENSMUST00000208658 2891 ntBASIC18.92■□□□□ 0.62
CcnkO88874 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CcnkO88874 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CcnkO88874 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CcnkO88874 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CcnkO88874 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.91■□□□□ 0.62
CcnkO88874 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CcnkO88874 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.91■□□□□ 0.62
CcnkO88874 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.91■□□□□ 0.62
CcnkO88874 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CcnkO88874 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CcnkO88874 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CcnkO88874 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CcnkO88874 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.9■□□□□ 0.62
CcnkO88874 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CcnkO88874 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.9■□□□□ 0.62
CcnkO88874 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CcnkO88874 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CcnkO88874 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CcnkO88874 Gm6311-201ENSMUST00000073790 878 ntBASIC18.88■□□□□ 0.61
CcnkO88874 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CcnkO88874 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CcnkO88874 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CcnkO88874 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CcnkO88874 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.88■□□□□ 0.61
CcnkO88874 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CcnkO88874 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CcnkO88874 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CcnkO88874 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CcnkO88874 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CcnkO88874 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.87■□□□□ 0.61
CcnkO88874 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CcnkO88874 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CcnkO88874 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CcnkO88874 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CcnkO88874 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.86■□□□□ 0.61
CcnkO88874 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CcnkO88874 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CcnkO88874 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CcnkO88874 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CcnkO88874 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CcnkO88874 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.86■□□□□ 0.61
CcnkO88874 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CcnkO88874 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CcnkO88874 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CcnkO88874 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CcnkO88874 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CcnkO88874 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CcnkO88874 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms