Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YNR048WYNR048W 1182 nt7.55□□□□□ -1.2
MSH4P40965 FES1YBR101C 873 nt7.55□□□□□ -1.2
MSH4P40965 RGD2YFL047W 2145 nt7.55□□□□□ -1.2
MSH4P40965 ECM38YLR299W 1983 nt7.55□□□□□ -1.2
MSH4P40965 PAP2YOL115W 1755 nt7.54□□□□□ -1.2
MSH4P40965 YPR1YDR368W 939 nt7.54□□□□□ -1.2
MSH4P40965 ATG36YJL185C 882 nt7.54□□□□□ -1.2
MSH4P40965 REX3YLR107W 1215 nt7.54□□□□□ -1.2
MSH4P40965 YMR279CYMR279C 1623 nt7.53□□□□□ -1.2
MSH4P40965 MIP1YOR330C 3765 nt7.53□□□□□ -1.2
MSH4P40965 BDF2YDL070W 1917 nt7.53□□□□□ -1.2
MSH4P40965 IME2YJL106W 1938 nt7.53□□□□□ -1.2
MSH4P40965 PEX22YAL055W 543 nt7.53□□□□□ -1.2
MSH4P40965 CBT1YKL208W 816 nt7.53□□□□□ -1.2
MSH4P40965 COX10YPL172C 1389 nt7.53□□□□□ -1.2
MSH4P40965 PRY3YJL078C 2646 nt7.53□□□□□ -1.2
MSH4P40965 ARP3YJR065C 1350 nt7.52□□□□□ -1.21
MSH4P40965 MPC2YHR162W 390 nt7.52□□□□□ -1.21
MSH4P40965 RDN5-2RDN5-2 119 nt7.52□□□□□ -1.21
MSH4P40965 RDN5-3RDN5-3 119 nt7.52□□□□□ -1.21
MSH4P40965 RDN5-4RDN5-4 119 nt7.52□□□□□ -1.21
MSH4P40965 RDN5-5RDN5-5 119 nt7.52□□□□□ -1.21
MSH4P40965 POP1YNL221C 2628 nt7.52□□□□□ -1.21
MSH4P40965 CCT8YJL008C 1707 nt7.52□□□□□ -1.21
MSH4P40965 YNL097W-AYNL097W-A 156 nt7.51□□□□□ -1.21
MSH4P40965 ECM2YBR065C 1095 nt7.51□□□□□ -1.21
MSH4P40965 OPI11YPR044C 354 nt7.51□□□□□ -1.21
MSH4P40965 PET112YBL080C 1626 nt7.51□□□□□ -1.21
MSH4P40965 YIL055CYIL055C 1884 nt7.51□□□□□ -1.21
MSH4P40965 KNS1YLL019C 2214 nt7.51□□□□□ -1.21
MSH4P40965 YFL013W-AYFL013W-A 804 nt7.5□□□□□ -1.21
MSH4P40965 MSA2YKR077W 1092 nt7.5□□□□□ -1.21
MSH4P40965 IRC11YOR013W 471 nt7.5□□□□□ -1.21
MSH4P40965 ARR1YPR199C 885 nt7.5□□□□□ -1.21
MSH4P40965 YDL158CYDL158C 309 nt7.49□□□□□ -1.21
MSH4P40965 PPH22YDL188C 1134 nt7.49□□□□□ -1.21
MSH4P40965 HSP12YFL014W 330 nt7.49□□□□□ -1.21
MSH4P40965 YGR127WYGR127W 939 nt7.49□□□□□ -1.21
MSH4P40965 YLR412C-AYLR412C-A 207 nt7.49□□□□□ -1.21
MSH4P40965 YNL194CYNL194C 906 nt7.49□□□□□ -1.21
MSH4P40965 RPS28AYOR167C 204 nt7.49□□□□□ -1.21
MSH4P40965 YOR200WYOR200W 399 nt7.49□□□□□ -1.21
MSH4P40965 CTF19YPL018W 1110 nt7.49□□□□□ -1.21
MSH4P40965 PHO3YBR092C 1404 nt7.49□□□□□ -1.21
MSH4P40965 EFT2YDR385W 2529 nt7.49□□□□□ -1.21
MSH4P40965 EFT1YOR133W 2529 nt7.49□□□□□ -1.21
MSH4P40965 STT3YGL022W 2157 nt7.49□□□□□ -1.21
MSH4P40965 DSF1YEL070W 1509 nt7.48□□□□□ -1.21
MSH4P40965 YNR073CYNR073C 1509 nt7.48□□□□□ -1.21
MSH4P40965 EAF5YEL018W 840 nt7.48□□□□□ -1.21
MSH4P40965 RUF23RUF23 254 nt7.48□□□□□ -1.21
MSH4P40965 RPL5YPL131W 894 nt7.48□□□□□ -1.21
MSH4P40965 YFR006WYFR006W 1608 nt7.48□□□□□ -1.21
MSH4P40965 CDC11YJR076C 1248 nt7.47□□□□□ -1.21
MSH4P40965 OPI8YKR035C 642 nt7.47□□□□□ -1.21
MSH4P40965 YNL319WYNL319W 441 nt7.47□□□□□ -1.21
MSH4P40965 POS5YPL188W 1245 nt7.47□□□□□ -1.21
MSH4P40965 ADH5YBR145W 1056 nt7.47□□□□□ -1.21
MSH4P40965 Q0255Q0255 1419 nt7.46□□□□□ -1.21
MSH4P40965 tG(GCC)BtG(GCC)B 71 nt7.46□□□□□ -1.22
MSH4P40965 SUF16tG(GCC)C 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)D1tG(GCC)D1 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)D2tG(GCC)D2 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)EtG(GCC)E 71 nt7.46□□□□□ -1.22
MSH4P40965 SUF20tG(GCC)F1 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)F2tG(GCC)F2 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)G1tG(GCC)G1 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)G2tG(GCC)G2 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)J1tG(GCC)J1 71 nt7.46□□□□□ -1.22
MSH4P40965 SUF23tG(GCC)J2 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)MtG(GCC)M 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)O1tG(GCC)O1 71 nt7.46□□□□□ -1.22
MSH4P40965 SUF17tG(GCC)O2 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)P1tG(GCC)P1 71 nt7.46□□□□□ -1.22
MSH4P40965 tG(GCC)P2tG(GCC)P2 71 nt7.46□□□□□ -1.22
MSH4P40965 HVG1YER039C 750 nt7.46□□□□□ -1.22
MSH4P40965 EDC1YGL222C 528 nt7.46□□□□□ -1.22
MSH4P40965 DYS1YHR068W 1164 nt7.46□□□□□ -1.22
MSH4P40965 ISY1YJR050W 708 nt7.46□□□□□ -1.22
MSH4P40965 DID2YKR035W-A 615 nt7.46□□□□□ -1.22
MSH4P40965 SUR7YML052W 909 nt7.46□□□□□ -1.22
MSH4P40965 HXK2YGL253W 1461 nt7.46□□□□□ -1.22
MSH4P40965 ACS1YAL054C 2142 nt7.46□□□□□ -1.22
MSH4P40965 YBR138CYBR138C 1575 nt7.46□□□□□ -1.22
MSH4P40965 snR82snR82 268 nt7.45□□□□□ -1.22
MSH4P40965 IRC7YFR055W 1023 nt7.45□□□□□ -1.22
MSH4P40965 LYS1YIR034C 1122 nt7.45□□□□□ -1.22
MSH4P40965 RFC4YOL094C 972 nt7.45□□□□□ -1.22
MSH4P40965 TAZ1YPR140W 1146 nt7.45□□□□□ -1.22
MSH4P40965 SLX1YBR228W 915 nt7.45□□□□□ -1.22
MSH4P40965 PRP40YKL012W 1752 nt7.45□□□□□ -1.22
MSH4P40965 AIM3YBR108W 2844 nt7.45□□□□□ -1.22
MSH4P40965 SLX5YDL013W 1860 nt7.45□□□□□ -1.22
MSH4P40965 PEX31YGR004W 1389 nt7.45□□□□□ -1.22
MSH4P40965 FET4YMR319C 1659 nt7.44□□□□□ -1.22
MSH4P40965 ISC1YER019W 1434 nt7.44□□□□□ -1.22
MSH4P40965 PTC3YBL056W 1407 nt7.44□□□□□ -1.22
MSH4P40965 YPR196WYPR196W 1413 nt7.44□□□□□ -1.22
MSH4P40965 YIR020W-AYIR020W-A 243 nt7.44□□□□□ -1.22
MSH4P40965 VAM3YOR106W 852 nt7.44□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 44 ms