Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YKR104WYKR104W 921 nt7.32□□□□□ -1.24
MSH3P25336 YOL046CYOL046C 675 nt7.32□□□□□ -1.24
MSH3P25336 TMA46YOR091W 1038 nt7.32□□□□□ -1.24
MSH3P25336 ERG10YPL028W 1197 nt7.32□□□□□ -1.24
MSH3P25336 ELC1YPL046C 300 nt7.32□□□□□ -1.24
MSH3P25336 YPR204WYPR204W 3099 nt7.32□□□□□ -1.24
MSH3P25336 PAF1YBR279W 1338 nt7.31□□□□□ -1.24
MSH3P25336 ARH1YDR376W 1482 nt7.31□□□□□ -1.24
MSH3P25336 VHT1YGR065C 1782 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)BtG(GCC)B 71 nt7.31□□□□□ -1.24
MSH3P25336 SUF16tG(GCC)C 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)D1tG(GCC)D1 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)D2tG(GCC)D2 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)EtG(GCC)E 71 nt7.31□□□□□ -1.24
MSH3P25336 SUF20tG(GCC)F1 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)F2tG(GCC)F2 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)G1tG(GCC)G1 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)G2tG(GCC)G2 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)J1tG(GCC)J1 71 nt7.31□□□□□ -1.24
MSH3P25336 SUF23tG(GCC)J2 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)MtG(GCC)M 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)O1tG(GCC)O1 71 nt7.31□□□□□ -1.24
MSH3P25336 SUF17tG(GCC)O2 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)P1tG(GCC)P1 71 nt7.31□□□□□ -1.24
MSH3P25336 tG(GCC)P2tG(GCC)P2 71 nt7.31□□□□□ -1.24
MSH3P25336 AIM46YHR199C 933 nt7.31□□□□□ -1.24
MSH3P25336 YMR075C-AYMR075C-A 366 nt7.31□□□□□ -1.24
MSH3P25336 DFR1YOR236W 636 nt7.31□□□□□ -1.24
MSH3P25336 RAD17YOR368W 1206 nt7.31□□□□□ -1.24
MSH3P25336 SAL1YNL083W 1485 nt7.3□□□□□ -1.24
MSH3P25336 FSH1YHR049W 732 nt7.3□□□□□ -1.24
MSH3P25336 GCV3YAL044C 513 nt7.3□□□□□ -1.24
MSH3P25336 YGP1YNL160W 1065 nt7.3□□□□□ -1.24
MSH3P25336 YOL038C-AYOL038C-A 96 nt7.3□□□□□ -1.24
MSH3P25336 DRS1YLL008W 2259 nt7.3□□□□□ -1.24
MSH3P25336 DOT1YDR440W 1749 nt7.3□□□□□ -1.24
MSH3P25336 PAP1YKR002W 1707 nt7.3□□□□□ -1.24
MSH3P25336 LSM6YDR378C 261 nt7.29□□□□□ -1.24
MSH3P25336 YJR107WYJR107W 987 nt7.29□□□□□ -1.24
MSH3P25336 OAC1YKL120W 975 nt7.29□□□□□ -1.24
MSH3P25336 URA1YKL216W 945 nt7.29□□□□□ -1.24
MSH3P25336 SWD1YAR003W 1281 nt7.29□□□□□ -1.24
MSH3P25336 KTR5YNL029C 1569 nt7.29□□□□□ -1.24
MSH3P25336 COQ1YBR003W 1422 nt7.28□□□□□ -1.24
MSH3P25336 PPT1YGR123C 1542 nt7.28□□□□□ -1.24
MSH3P25336 PPM2YOL141W 2088 nt7.28□□□□□ -1.24
MSH3P25336 HEM1YDR232W 1647 nt7.28□□□□□ -1.24
MSH3P25336 HED1YDR014W-A 489 nt7.28□□□□□ -1.24
MSH3P25336 YDR415CYDR415C 1125 nt7.28□□□□□ -1.24
MSH3P25336 YEA6YEL006W 1008 nt7.28□□□□□ -1.24
MSH3P25336 AIR1YIL079C 1083 nt7.28□□□□□ -1.24
MSH3P25336 YKR032WYKR032W 315 nt7.28□□□□□ -1.24
MSH3P25336 MRPL19YNL185C 477 nt7.28□□□□□ -1.24
MSH3P25336 HST2YPL015C 1074 nt7.28□□□□□ -1.24
MSH3P25336 YPR076WYPR076W 375 nt7.28□□□□□ -1.24
MSH3P25336 YBR113WYBR113W 483 nt7.28□□□□□ -1.24
MSH3P25336 MST1YKL194C 1389 nt7.28□□□□□ -1.24
MSH3P25336 NMT1YLR195C 1368 nt7.28□□□□□ -1.24
MSH3P25336 YDR132CYDR132C 1488 nt7.28□□□□□ -1.24
MSH3P25336 IPI3YNL182C 1668 nt7.28□□□□□ -1.24
MSH3P25336 JJJ3YJR097W 519 nt7.27□□□□□ -1.25
MSH3P25336 XPT1YJR133W 630 nt7.27□□□□□ -1.25
MSH3P25336 MIA40YKL195W 1212 nt7.27□□□□□ -1.25
MSH3P25336 TAZ1YPR140W 1146 nt7.27□□□□□ -1.25
MSH3P25336 ADH5YBR145W 1056 nt7.27□□□□□ -1.25
MSH3P25336 GPA1YHR005C 1419 nt7.27□□□□□ -1.25
MSH3P25336 PCL6YER059W 1263 nt7.26□□□□□ -1.25
MSH3P25336 AGX1YFL030W 1158 nt7.26□□□□□ -1.25
MSH3P25336 YPT1YFL038C 621 nt7.26□□□□□ -1.25
MSH3P25336 MRPL25YGR076C 474 nt7.26□□□□□ -1.25
MSH3P25336 YJL144WYJL144W 315 nt7.26□□□□□ -1.25
MSH3P25336 YKL018C-AYKL018C-A 300 nt7.26□□□□□ -1.25
MSH3P25336 YKL077WYKL077W 1179 nt7.26□□□□□ -1.25
MSH3P25336 CUE4YML101C 354 nt7.26□□□□□ -1.25
MSH3P25336 PET112YBL080C 1626 nt7.26□□□□□ -1.25
MSH3P25336 HEM2YGL040C 1029 nt7.25□□□□□ -1.25
MSH3P25336 LIP2YLR239C 987 nt7.25□□□□□ -1.25
MSH3P25336 RSF1YMR030W 1131 nt7.25□□□□□ -1.25
MSH3P25336 MCP1YOR228C 909 nt7.25□□□□□ -1.25
MSH3P25336 AIM3YBR108W 2844 nt7.24□□□□□ -1.25
MSH3P25336 PMT3YOR321W 2262 nt7.24□□□□□ -1.25
MSH3P25336 IMG2YCR071C 441 nt7.24□□□□□ -1.25
MSH3P25336 YGR283CYGR283C 1026 nt7.24□□□□□ -1.25
MSH3P25336 ERV41YML067C 1059 nt7.24□□□□□ -1.25
MSH3P25336 ASR1YPR093C 867 nt7.24□□□□□ -1.25
MSH3P25336 GFA1YKL104C 2154 nt7.24□□□□□ -1.25
MSH3P25336 IES1YFL013C 2079 nt7.24□□□□□ -1.25
MSH3P25336 PXL1YKR090W 2121 nt7.24□□□□□ -1.25
MSH3P25336 RSA4YCR072C 1548 nt7.23□□□□□ -1.25
MSH3P25336 POX1YGL205W 2247 nt7.23□□□□□ -1.25
MSH3P25336 PPH21YDL134C 1110 nt7.23□□□□□ -1.25
MSH3P25336 DIN7YDR263C 1293 nt7.23□□□□□ -1.25
MSH3P25336 OKP1YGR179C 1221 nt7.23□□□□□ -1.25
MSH3P25336 YHR054CYHR054C 1065 nt7.23□□□□□ -1.25
MSH3P25336 ATG36YJL185C 882 nt7.23□□□□□ -1.25
MSH3P25336 MFA2YNL145W 117 nt7.23□□□□□ -1.25
MSH3P25336 PFA4YOL003C 1137 nt7.23□□□□□ -1.25
MSH3P25336 YOL107WYOL107W 1029 nt7.23□□□□□ -1.25
MSH3P25336 OAZ1YPL052W 879 nt7.23□□□□□ -1.25
MSH3P25336 LGE1YPL055C 999 nt7.23□□□□□ -1.25
Retrieved 100 of 7,029 protein–RNA pairs in 59.2 ms