Protein–RNA interactions for Protein: Q8BHC1

Rab39b, Ras-related protein Rab-39B, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39bQ8BHC1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab39bQ8BHC1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab39bQ8BHC1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rab39bQ8BHC1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab39bQ8BHC1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rab39bQ8BHC1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rab39bQ8BHC1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab39bQ8BHC1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rab39bQ8BHC1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rab39bQ8BHC1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Gm44428-201ENSMUST00000204474 874 ntBASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab39bQ8BHC1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rab39bQ8BHC1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.7■□□□□ 0.58
Rab39bQ8BHC1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.7■□□□□ 0.58
Rab39bQ8BHC1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab39bQ8BHC1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab39bQ8BHC1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.69■□□□□ 0.58
Rab39bQ8BHC1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab39bQ8BHC1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab39bQ8BHC1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.69■□□□□ 0.58
Rab39bQ8BHC1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.69■□□□□ 0.58
Rab39bQ8BHC1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab39bQ8BHC1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.68■□□□□ 0.58
Rab39bQ8BHC1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab39bQ8BHC1 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.68■□□□□ 0.58
Rab39bQ8BHC1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab39bQ8BHC1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab39bQ8BHC1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.67■□□□□ 0.58
Rab39bQ8BHC1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab39bQ8BHC1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab39bQ8BHC1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Gm10420-201ENSMUST00000121713 882 ntBASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab39bQ8BHC1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab39bQ8BHC1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab39bQ8BHC1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab39bQ8BHC1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab39bQ8BHC1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab39bQ8BHC1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab39bQ8BHC1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rab39bQ8BHC1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rab39bQ8BHC1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab39bQ8BHC1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.64■□□□□ 0.57
Rab39bQ8BHC1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rab39bQ8BHC1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rab39bQ8BHC1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.64■□□□□ 0.57
Rab39bQ8BHC1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.64■□□□□ 0.57
Rab39bQ8BHC1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab39bQ8BHC1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab39bQ8BHC1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab39bQ8BHC1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab39bQ8BHC1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab39bQ8BHC1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab39bQ8BHC1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab39bQ8BHC1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab39bQ8BHC1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab39bQ8BHC1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rab39bQ8BHC1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab39bQ8BHC1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab39bQ8BHC1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rab39bQ8BHC1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms