Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 CLN1YMR199W 1641 nt6.98□□□□□ -1.29
MSH2P25847 TDP1YBR223C 1635 nt6.98□□□□□ -1.29
MSH2P25847 YGL235WYGL235W 537 nt6.98□□□□□ -1.29
MSH2P25847 MTR3YGR158C 753 nt6.98□□□□□ -1.29
MSH2P25847 PEX12YMR026C 1200 nt6.98□□□□□ -1.29
MSH2P25847 HTZ1YOL012C 405 nt6.98□□□□□ -1.29
MSH2P25847 ASR1YPR093C 867 nt6.98□□□□□ -1.29
MSH2P25847 CEM1YER061C 1329 nt6.98□□□□□ -1.29
MSH2P25847 APE4YHR113W 1473 nt6.98□□□□□ -1.29
MSH2P25847 SGE1YPR198W 1632 nt6.98□□□□□ -1.29
MSH2P25847 PLB2YMR006C 2121 nt6.97□□□□□ -1.29
MSH2P25847 YNL234WYNL234W 1281 nt6.97□□□□□ -1.29
MSH2P25847 ILV6YCL009C 930 nt6.97□□□□□ -1.29
MSH2P25847 YDR132CYDR132C 1488 nt6.97□□□□□ -1.29
MSH2P25847 VMA2YBR127C 1554 nt6.96□□□□□ -1.29
MSH2P25847 LCL3YGL085W 825 nt6.96□□□□□ -1.3
MSH2P25847 MRPL25YGR076C 474 nt6.96□□□□□ -1.3
MSH2P25847 DBR1YKL149C 1218 nt6.96□□□□□ -1.3
MSH2P25847 RRN10YBL025W 438 nt6.96□□□□□ -1.3
MSH2P25847 RKM4YDR257C 1485 nt6.96□□□□□ -1.3
MSH2P25847 AMN1YBR158W 1650 nt6.96□□□□□ -1.3
MSH2P25847 ECM7YLR443W 1347 nt6.96□□□□□ -1.3
MSH2P25847 YKR075CYKR075C 924 nt6.95□□□□□ -1.3
MSH2P25847 YMR252CYMR252C 405 nt6.95□□□□□ -1.3
MSH2P25847 SAL1YNL083W 1485 nt6.95□□□□□ -1.3
MSH2P25847 PPT1YGR123C 1542 nt6.95□□□□□ -1.3
MSH2P25847 CRH1YGR189C 1524 nt6.95□□□□□ -1.3
MSH2P25847 BRN1YBL097W 2265 nt6.94□□□□□ -1.3
MSH2P25847 MSG5YNL053W 1470 nt6.94□□□□□ -1.3
MSH2P25847 MRPL28YDR462W 444 nt6.94□□□□□ -1.3
MSH2P25847 PCL6YER059W 1263 nt6.94□□□□□ -1.3
MSH2P25847 YAL045CYAL045C 309 nt6.94□□□□□ -1.3
MSH2P25847 YET2YMR040W 483 nt6.94□□□□□ -1.3
MSH2P25847 ARC35YNR035C 1029 nt6.94□□□□□ -1.3
MSH2P25847 LPL1YOR059C 1353 nt6.94□□□□□ -1.3
MSH2P25847 SPO77YLR341W 1434 nt6.93□□□□□ -1.3
MSH2P25847 IRS4YKR019C 1848 nt6.93□□□□□ -1.3
MSH2P25847 ERS1YCR075C 783 nt6.93□□□□□ -1.3
MSH2P25847 YEL075W-AYEL075W-A 612 nt6.93□□□□□ -1.3
MSH2P25847 MED6YHR058C 888 nt6.93□□□□□ -1.3
MSH2P25847 RPL2BYIL018W 765 nt6.93□□□□□ -1.3
MSH2P25847 YLR463CYLR463C 552 nt6.93□□□□□ -1.3
MSH2P25847 ISR1YPR106W 1332 nt6.93□□□□□ -1.3
MSH2P25847 MMR1YLR190W 1476 nt6.92□□□□□ -1.3
MSH2P25847 RAM1YDL090C 1296 nt6.92□□□□□ -1.3
MSH2P25847 RTT103YDR289C 1230 nt6.92□□□□□ -1.3
MSH2P25847 YOL099CYOL099C 492 nt6.92□□□□□ -1.3
MSH2P25847 SMK1YPR054W 1167 nt6.92□□□□□ -1.3
MSH2P25847 GPD2YOL059W 1323 nt6.92□□□□□ -1.3
MSH2P25847 BNA5YLR231C 1362 nt6.92□□□□□ -1.3
MSH2P25847 HER2YMR293C 1395 nt6.92□□□□□ -1.3
MSH2P25847 MCH2YKL221W 1422 nt6.92□□□□□ -1.3
MSH2P25847 YEL074WYEL074W 339 nt6.91□□□□□ -1.3
MSH2P25847 ASF1YJL115W 840 nt6.91□□□□□ -1.3
MSH2P25847 YKL018C-AYKL018C-A 300 nt6.91□□□□□ -1.3
MSH2P25847 MRPS18YNL306W 654 nt6.91□□□□□ -1.3
MSH2P25847 snR34snR34 203 nt6.91□□□□□ -1.3
MSH2P25847 TUF1YOR187W 1314 nt6.91□□□□□ -1.3
MSH2P25847 YNR005CYNR005C 405 nt6.9□□□□□ -1.3
MSH2P25847 NTG2YOL043C 1143 nt6.9□□□□□ -1.3
MSH2P25847 WTM1YOR230W 1314 nt6.9□□□□□ -1.3
MSH2P25847 GPH1YPR160W 2709 nt6.9□□□□□ -1.31
MSH2P25847 VBA5YKR105C 1749 nt6.9□□□□□ -1.31
MSH2P25847 RPO26YPR187W 468 nt6.89□□□□□ -1.31
MSH2P25847 CYB2YML054C 1776 nt6.89□□□□□ -1.31
MSH2P25847 YBR241CYBR241C 1467 nt6.88□□□□□ -1.31
MSH2P25847 AAD6YFL056C 639 nt6.88□□□□□ -1.31
MSH2P25847 NCS6YGL211W 1080 nt6.88□□□□□ -1.31
MSH2P25847 FMO1YHR176W 1299 nt6.88□□□□□ -1.31
MSH2P25847 RDN5-2RDN5-2 119 nt6.88□□□□□ -1.31
MSH2P25847 RDN5-3RDN5-3 119 nt6.88□□□□□ -1.31
MSH2P25847 RDN5-4RDN5-4 119 nt6.88□□□□□ -1.31
MSH2P25847 RDN5-5RDN5-5 119 nt6.88□□□□□ -1.31
MSH2P25847 YMR114CYMR114C 1107 nt6.88□□□□□ -1.31
MSH2P25847 SPC24YMR117C 642 nt6.88□□□□□ -1.31
MSH2P25847 TAF9YMR236W 474 nt6.88□□□□□ -1.31
MSH2P25847 SRP101YDR292C 1866 nt6.87□□□□□ -1.31
MSH2P25847 HMLALPHA1YCL066W 528 nt6.87□□□□□ -1.31
MSH2P25847 MATALPHA1YCR040W 528 nt6.87□□□□□ -1.31
MSH2P25847 RTN1YDR233C 888 nt6.87□□□□□ -1.31
MSH2P25847 TFG2YGR005C 1203 nt6.87□□□□□ -1.31
MSH2P25847 KRE9YJL174W 831 nt6.87□□□□□ -1.31
MSH2P25847 PML1YLR016C 615 nt6.87□□□□□ -1.31
MSH2P25847 YLR361C-AYLR361C-A 297 nt6.87□□□□□ -1.31
MSH2P25847 LSC1YOR142W 990 nt6.87□□□□□ -1.31
MSH2P25847 RRP9YPR137W 1722 nt6.87□□□□□ -1.31
MSH2P25847 SAS4YDR181C 1446 nt6.86□□□□□ -1.31
MSH2P25847 GCG1YER163C 699 nt6.86□□□□□ -1.31
MSH2P25847 IRC7YFR055W 1023 nt6.86□□□□□ -1.31
MSH2P25847 PTC7YHR076W 1032 nt6.86□□□□□ -1.31
MSH2P25847 TPK1YJL164C 1194 nt6.86□□□□□ -1.31
MSH2P25847 REC107YJR021C 945 nt6.86□□□□□ -1.31
MSH2P25847 GSH1YJL101C 2037 nt6.85□□□□□ -1.31
MSH2P25847 NTG1YAL015C 1200 nt6.85□□□□□ -1.31
MSH2P25847 RPL31BYLR406C 342 nt6.85□□□□□ -1.31
MSH2P25847 YML018CYML018C 1182 nt6.85□□□□□ -1.31
MSH2P25847 PPA2YMR267W 933 nt6.85□□□□□ -1.31
MSH2P25847 HBN1YCL026C-B 582 nt6.85□□□□□ -1.31
MSH2P25847 CCT3YJL014W 1605 nt6.85□□□□□ -1.31
MSH2P25847 MSS1YMR023C 1581 nt6.85□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 36.4 ms