Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 YPL250W-AYPL250W-A 288 nt7.09□□□□□ -1.27
TY1B-AO13527 RVB2YPL235W 1416 nt7.09□□□□□ -1.28
TY1B-AO13527 TRP5YGL026C 2124 nt7.09□□□□□ -1.28
TY1B-AO13527 EDE1YBL047C 4146 nt7.08□□□□□ -1.28
TY1B-AO13527 ARE2YNR019W 1929 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)BtG(GCC)B 71 nt7.08□□□□□ -1.28
TY1B-AO13527 SUF16tG(GCC)C 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)D1tG(GCC)D1 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)D2tG(GCC)D2 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)EtG(GCC)E 71 nt7.08□□□□□ -1.28
TY1B-AO13527 SUF20tG(GCC)F1 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)F2tG(GCC)F2 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)G1tG(GCC)G1 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)G2tG(GCC)G2 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)J1tG(GCC)J1 71 nt7.08□□□□□ -1.28
TY1B-AO13527 SUF23tG(GCC)J2 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)MtG(GCC)M 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)O1tG(GCC)O1 71 nt7.08□□□□□ -1.28
TY1B-AO13527 SUF17tG(GCC)O2 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)P1tG(GCC)P1 71 nt7.08□□□□□ -1.28
TY1B-AO13527 tG(GCC)P2tG(GCC)P2 71 nt7.08□□□□□ -1.28
TY1B-AO13527 ARC35YNR035C 1029 nt7.08□□□□□ -1.28
TY1B-AO13527 VHT1YGR065C 1782 nt7.08□□□□□ -1.28
TY1B-AO13527 IVY1YDR229W 1362 nt7.08□□□□□ -1.28
TY1B-AO13527 ERS1YCR075C 783 nt7.07□□□□□ -1.28
TY1B-AO13527 IRC7YFR055W 1023 nt7.07□□□□□ -1.28
TY1B-AO13527 MIA40YKL195W 1212 nt7.07□□□□□ -1.28
TY1B-AO13527 MCH2YKL221W 1422 nt7.07□□□□□ -1.28
TY1B-AO13527 PAP2YOL115W 1755 nt7.07□□□□□ -1.28
TY1B-AO13527 FPR3YML074C 1236 nt7.06□□□□□ -1.28
TY1B-AO13527 PTC4YBR125C 1182 nt7.06□□□□□ -1.28
TY1B-AO13527 RAP1YNL216W 2484 nt7.06□□□□□ -1.28
TY1B-AO13527 PPT1YGR123C 1542 nt7.06□□□□□ -1.28
TY1B-AO13527 CRF1YDR223W 1404 nt7.05□□□□□ -1.28
TY1B-AO13527 RAD59YDL059C 717 nt7.05□□□□□ -1.28
TY1B-AO13527 GTO3YMR251W 1101 nt7.05□□□□□ -1.28
TY1B-AO13527 YBR241CYBR241C 1467 nt7.04□□□□□ -1.28
TY1B-AO13527 RGD2YFL047W 2145 nt7.04□□□□□ -1.28
TY1B-AO13527 YOR012WYOR012W 414 nt7.04□□□□□ -1.28
TY1B-AO13527 UIP4YPL186C 915 nt7.04□□□□□ -1.28
TY1B-AO13527 HBN1YCL026C-B 582 nt7.04□□□□□ -1.28
TY1B-AO13527 CSC1YLR241W 2349 nt7.04□□□□□ -1.28
TY1B-AO13527 SDH4YDR178W 546 nt7.03□□□□□ -1.28
TY1B-AO13527 YHR213W-AYHR213W-A 234 nt7.03□□□□□ -1.28
TY1B-AO13527 MDE1YJR024C 735 nt7.03□□□□□ -1.28
TY1B-AO13527 GCN3YKR026C 918 nt7.03□□□□□ -1.28
TY1B-AO13527 DID2YKR035W-A 615 nt7.03□□□□□ -1.28
TY1B-AO13527 GLC8YMR311C 690 nt7.03□□□□□ -1.28
TY1B-AO13527 ECM31YBR176W 939 nt7.03□□□□□ -1.28
TY1B-AO13527 LDB16YCL005W 771 nt7.03□□□□□ -1.28
TY1B-AO13527 NTE1YML059C 5040 nt7.03□□□□□ -1.28
TY1B-AO13527 SKN1YGR143W 2316 nt7.02□□□□□ -1.28
TY1B-AO13527 OPT1YJL212C 2400 nt7.02□□□□□ -1.28
TY1B-AO13527 ASN1YPR145W 1719 nt7.02□□□□□ -1.29
TY1B-AO13527 IME2YJL106W 1938 nt7.02□□□□□ -1.29
TY1B-AO13527 YHL018WYHL018W 363 nt7.02□□□□□ -1.29
TY1B-AO13527 DFR1YOR236W 636 nt7.02□□□□□ -1.29
TY1B-AO13527 SNU71YGR013W 1863 nt7.02□□□□□ -1.29
TY1B-AO13527 YGR054WYGR054W 1929 nt7.01□□□□□ -1.29
TY1B-AO13527 PAT1YCR077C 2391 nt7.01□□□□□ -1.29
TY1B-AO13527 YIL055CYIL055C 1884 nt7.01□□□□□ -1.29
TY1B-AO13527 YEL020CYEL020C 1683 nt7.01□□□□□ -1.29
TY1B-AO13527 YDL085C-AYDL085C-A 207 nt7.01□□□□□ -1.29
TY1B-AO13527 YIL077CYIL077C 963 nt7□□□□□ -1.29
TY1B-AO13527 ENV7YPL236C 1095 nt7□□□□□ -1.29
TY1B-AO13527 BUD9YGR041W 1644 nt7□□□□□ -1.29
TY1B-AO13527 YLL066CYLL066C 3618 nt7□□□□□ -1.29
TY1B-AO13527 YLL067CYLL067C 3618 nt7□□□□□ -1.29
TY1B-AO13527 LYS21YDL131W 1323 nt7□□□□□ -1.29
TY1B-AO13527 PCS60YBR222C 1632 nt6.99□□□□□ -1.29
TY1B-AO13527 SIT4YDL047W 936 nt6.99□□□□□ -1.29
TY1B-AO13527 PAC10YGR078C 600 nt6.99□□□□□ -1.29
TY1B-AO13527 MEH1YKR007W 555 nt6.99□□□□□ -1.29
TY1B-AO13527 YNL120CYNL120C 486 nt6.99□□□□□ -1.29
TY1B-AO13527 YPL041CYPL041C 624 nt6.99□□□□□ -1.29
TY1B-AO13527 IMA2YOL157C 1770 nt6.99□□□□□ -1.29
TY1B-AO13527 TFC6YDR362C 2019 nt6.98□□□□□ -1.29
TY1B-AO13527 YDL218WYDL218W 954 nt6.98□□□□□ -1.29
TY1B-AO13527 YDR415CYDR415C 1125 nt6.98□□□□□ -1.29
TY1B-AO13527 YPT1YFL038C 621 nt6.98□□□□□ -1.29
TY1B-AO13527 TFB4YPR056W 1017 nt6.98□□□□□ -1.29
TY1B-AO13527 NHA1YLR138W 2958 nt6.98□□□□□ -1.29
TY1B-AO13527 YPR204WYPR204W 3099 nt6.97□□□□□ -1.29
TY1B-AO13527 TAH11YJR046W 1815 nt6.97□□□□□ -1.29
TY1B-AO13527 YDR015CYDR015C 240 nt6.97□□□□□ -1.29
TY1B-AO13527 SRP101YDR292C 1866 nt6.97□□□□□ -1.29
TY1B-AO13527 CCP1YKR066C 1086 nt6.97□□□□□ -1.29
TY1B-AO13527 SEN34YAR008W 828 nt6.97□□□□□ -1.29
TY1B-AO13527 HEM1YDR232W 1647 nt6.97□□□□□ -1.29
TY1B-AO13527 KTR5YNL029C 1569 nt6.96□□□□□ -1.29
TY1B-AO13527 ECM38YLR299W 1983 nt6.95□□□□□ -1.3
TY1B-AO13527 DOT5YIL010W 648 nt6.95□□□□□ -1.3
TY1B-AO13527 COX16YJL003W 357 nt6.95□□□□□ -1.3
TY1B-AO13527 NUP84YDL116W 2181 nt6.95□□□□□ -1.3
TY1B-AO13527 STE13YOR219C 2796 nt6.94□□□□□ -1.3
TY1B-AO13527 QNS1YHR074W 2145 nt6.94□□□□□ -1.3
TY1B-AO13527 BUD32YGR262C 786 nt6.94□□□□□ -1.3
TY1B-AO13527 RPS3YNL178W 723 nt6.94□□□□□ -1.3
TY1B-AO13527 TOS6YNL300W 309 nt6.94□□□□□ -1.3
TY1B-AO13527 TEL2YGR099W 2067 nt6.94□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 53.2 ms