Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BckdkO55028 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BckdkO55028 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.38■□□□□ 0.85
BckdkO55028 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BckdkO55028 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BckdkO55028 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BckdkO55028 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BckdkO55028 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BckdkO55028 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.37■□□□□ 0.85
BckdkO55028 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BckdkO55028 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.37■□□□□ 0.85
BckdkO55028 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.37■□□□□ 0.85
BckdkO55028 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BckdkO55028 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BckdkO55028 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BckdkO55028 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BckdkO55028 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BckdkO55028 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BckdkO55028 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
BckdkO55028 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BckdkO55028 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BckdkO55028 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
BckdkO55028 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BckdkO55028 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BckdkO55028 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.34■□□□□ 0.85
BckdkO55028 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BckdkO55028 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.34■□□□□ 0.85
BckdkO55028 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
BckdkO55028 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.33■□□□□ 0.85
BckdkO55028 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
BckdkO55028 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BckdkO55028 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.33■□□□□ 0.84
BckdkO55028 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BckdkO55028 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BckdkO55028 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BckdkO55028 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BckdkO55028 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BckdkO55028 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.32■□□□□ 0.84
BckdkO55028 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BckdkO55028 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BckdkO55028 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BckdkO55028 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BckdkO55028 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BckdkO55028 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
BckdkO55028 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BckdkO55028 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
BckdkO55028 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
BckdkO55028 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BckdkO55028 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
BckdkO55028 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BckdkO55028 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
BckdkO55028 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BckdkO55028 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.29■□□□□ 0.84
BckdkO55028 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BckdkO55028 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.29■□□□□ 0.84
BckdkO55028 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.29■□□□□ 0.84
BckdkO55028 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BckdkO55028 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BckdkO55028 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
BckdkO55028 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BckdkO55028 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
BckdkO55028 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.28■□□□□ 0.84
BckdkO55028 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BckdkO55028 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BckdkO55028 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BckdkO55028 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BckdkO55028 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BckdkO55028 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.27■□□□□ 0.84
BckdkO55028 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BckdkO55028 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BckdkO55028 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BckdkO55028 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BckdkO55028 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BckdkO55028 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BckdkO55028 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
BckdkO55028 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
BckdkO55028 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BckdkO55028 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BckdkO55028 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BckdkO55028 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BckdkO55028 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BckdkO55028 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BckdkO55028 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BckdkO55028 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.25■□□□□ 0.83
BckdkO55028 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BckdkO55028 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.25■□□□□ 0.83
BckdkO55028 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BckdkO55028 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BckdkO55028 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BckdkO55028 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.24■□□□□ 0.83
BckdkO55028 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
BckdkO55028 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BckdkO55028 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
BckdkO55028 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BckdkO55028 Gm44428-201ENSMUST00000204474 874 ntBASIC20.23■□□□□ 0.83
BckdkO55028 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.23■□□□□ 0.83
BckdkO55028 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BckdkO55028 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BckdkO55028 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BckdkO55028 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms