Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 YJL045WYJL045W 1905 nt6.82□□□□□ -1.32
HRD3Q05787 CTF3YLR381W 2202 nt6.81□□□□□ -1.32
HRD3Q05787 CDC1YDR182W 1476 nt6.81□□□□□ -1.32
HRD3Q05787 YRB2YIL063C 984 nt6.81□□□□□ -1.32
HRD3Q05787 YOR012WYOR012W 414 nt6.81□□□□□ -1.32
HRD3Q05787 YHR020WYHR020W 2067 nt6.81□□□□□ -1.32
HRD3Q05787 GUT1YHL032C 2130 nt6.8□□□□□ -1.32
HRD3Q05787 YDR187CYDR187C 519 nt6.8□□□□□ -1.32
HRD3Q05787 YHR213W-BYHR213W-B 300 nt6.79□□□□□ -1.32
HRD3Q05787 AIM2YAL049C 741 nt6.79□□□□□ -1.32
HRD3Q05787 YAR064WYAR064W 300 nt6.79□□□□□ -1.32
HRD3Q05787 YBR027CYBR027C 333 nt6.79□□□□□ -1.32
HRD3Q05787 POB3YML069W 1659 nt6.79□□□□□ -1.32
HRD3Q05787 PPM2YOL141W 2088 nt6.79□□□□□ -1.32
HRD3Q05787 YHK8YHR048W 1545 nt6.79□□□□□ -1.32
HRD3Q05787 AQR1YNL065W 1761 nt6.78□□□□□ -1.32
HRD3Q05787 STF1YDL130W-A 261 nt6.78□□□□□ -1.32
HRD3Q05787 YEL075W-AYEL075W-A 612 nt6.78□□□□□ -1.32
HRD3Q05787 MTR3YGR158C 753 nt6.78□□□□□ -1.32
HRD3Q05787 MGM101YJR144W 810 nt6.78□□□□□ -1.32
HRD3Q05787 YLR463CYLR463C 552 nt6.78□□□□□ -1.32
HRD3Q05787 FYV1YDR024W 486 nt6.77□□□□□ -1.33
HRD3Q05787 TFG2YGR005C 1203 nt6.77□□□□□ -1.33
HRD3Q05787 TAE1YBR261C 699 nt6.77□□□□□ -1.33
HRD3Q05787 CCR4YAL021C 2514 nt6.77□□□□□ -1.33
HRD3Q05787 ECM27YJR106W 2178 nt6.76□□□□□ -1.33
HRD3Q05787 RRP9YPR137W 1722 nt6.76□□□□□ -1.33
HRD3Q05787 CUP2YGL166W 678 nt6.76□□□□□ -1.33
HRD3Q05787 YMR122CYMR122C 375 nt6.76□□□□□ -1.33
HRD3Q05787 ATO2YNR002C 849 nt6.76□□□□□ -1.33
HRD3Q05787 COX10YPL172C 1389 nt6.76□□□□□ -1.33
HRD3Q05787 HDA1YNL021W 2121 nt6.76□□□□□ -1.33
HRD3Q05787 TDH2YJR009C 999 nt6.75□□□□□ -1.33
HRD3Q05787 RDN5-2RDN5-2 119 nt6.75□□□□□ -1.33
HRD3Q05787 RDN5-3RDN5-3 119 nt6.75□□□□□ -1.33
HRD3Q05787 RDN5-4RDN5-4 119 nt6.75□□□□□ -1.33
HRD3Q05787 RDN5-5RDN5-5 119 nt6.75□□□□□ -1.33
HRD3Q05787 CCT8YJL008C 1707 nt6.75□□□□□ -1.33
HRD3Q05787 STT3YGL022W 2157 nt6.74□□□□□ -1.33
HRD3Q05787 ERS1YCR075C 783 nt6.74□□□□□ -1.33
HRD3Q05787 YFL013W-AYFL013W-A 804 nt6.74□□□□□ -1.33
HRD3Q05787 YML018CYML018C 1182 nt6.74□□□□□ -1.33
HRD3Q05787 SWP1YMR149W 861 nt6.74□□□□□ -1.33
HRD3Q05787 IRC11YOR013W 471 nt6.74□□□□□ -1.33
HRD3Q05787 RGD2YFL047W 2145 nt6.74□□□□□ -1.33
HRD3Q05787 BNA3YJL060W 1335 nt6.74□□□□□ -1.33
HRD3Q05787 UIP5YKR044W 1332 nt6.74□□□□□ -1.33
HRD3Q05787 YIL108WYIL108W 2091 nt6.73□□□□□ -1.33
HRD3Q05787 YHR131CYHR131C 2553 nt6.73□□□□□ -1.33
HRD3Q05787 DID2YKR035W-A 615 nt6.73□□□□□ -1.33
HRD3Q05787 CTF19YPL018W 1110 nt6.73□□□□□ -1.33
HRD3Q05787 MCH2YKL221W 1422 nt6.73□□□□□ -1.33
HRD3Q05787 VMA3YEL027W 483 nt6.72□□□□□ -1.33
HRD3Q05787 ATG36YJL185C 882 nt6.72□□□□□ -1.33
HRD3Q05787 HBN1YCL026C-B 582 nt6.72□□□□□ -1.33
HRD3Q05787 ZWF1YNL241C 1518 nt6.71□□□□□ -1.33
HRD3Q05787 tG(GCC)BtG(GCC)B 71 nt6.71□□□□□ -1.34
HRD3Q05787 SUF16tG(GCC)C 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)D1tG(GCC)D1 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)D2tG(GCC)D2 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)EtG(GCC)E 71 nt6.71□□□□□ -1.34
HRD3Q05787 SUF20tG(GCC)F1 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)F2tG(GCC)F2 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)G1tG(GCC)G1 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)G2tG(GCC)G2 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)J1tG(GCC)J1 71 nt6.71□□□□□ -1.34
HRD3Q05787 SUF23tG(GCC)J2 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)MtG(GCC)M 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)O1tG(GCC)O1 71 nt6.71□□□□□ -1.34
HRD3Q05787 SUF17tG(GCC)O2 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)P1tG(GCC)P1 71 nt6.71□□□□□ -1.34
HRD3Q05787 tG(GCC)P2tG(GCC)P2 71 nt6.71□□□□□ -1.34
HRD3Q05787 MSP1YGR028W 1089 nt6.71□□□□□ -1.34
HRD3Q05787 YJL211CYJL211C 444 nt6.71□□□□□ -1.34
HRD3Q05787 ARC35YNR035C 1029 nt6.71□□□□□ -1.34
HRD3Q05787 RFC4YOL094C 972 nt6.71□□□□□ -1.34
HRD3Q05787 RFS1YBR052C 633 nt6.71□□□□□ -1.34
HRD3Q05787 SLA2YNL243W 2907 nt6.71□□□□□ -1.34
HRD3Q05787 MSO1YNR049C 633 nt6.7□□□□□ -1.34
HRD3Q05787 SGF29YCL010C 780 nt6.7□□□□□ -1.34
HRD3Q05787 CCT3YJL014W 1605 nt6.69□□□□□ -1.34
HRD3Q05787 YBR241CYBR241C 1467 nt6.69□□□□□ -1.34
HRD3Q05787 FAL1YDR021W 1200 nt6.69□□□□□ -1.34
HRD3Q05787 PAC10YGR078C 600 nt6.69□□□□□ -1.34
HRD3Q05787 FSF1YOR271C 984 nt6.69□□□□□ -1.34
HRD3Q05787 YPL257WYPL257W 582 nt6.69□□□□□ -1.34
HRD3Q05787 EEB1YPL095C 1371 nt6.69□□□□□ -1.34
HRD3Q05787 YDR387CYDR387C 1668 nt6.68□□□□□ -1.34
HRD3Q05787 PPH22YDL188C 1134 nt6.68□□□□□ -1.34
HRD3Q05787 MPC2YHR162W 390 nt6.68□□□□□ -1.34
HRD3Q05787 YJR146WYJR146W 354 nt6.68□□□□□ -1.34
HRD3Q05787 YMR295CYMR295C 594 nt6.68□□□□□ -1.34
HRD3Q05787 DFR1YOR236W 636 nt6.68□□□□□ -1.34
HRD3Q05787 MIP1YOR330C 3765 nt6.68□□□□□ -1.34
HRD3Q05787 YMR279CYMR279C 1623 nt6.68□□□□□ -1.34
HRD3Q05787 TAH11YJR046W 1815 nt6.67□□□□□ -1.34
HRD3Q05787 LYS1YIR034C 1122 nt6.67□□□□□ -1.34
HRD3Q05787 SRL2YLR082C 1179 nt6.66□□□□□ -1.34
HRD3Q05787 PTC3YBL056W 1407 nt6.66□□□□□ -1.34
HRD3Q05787 ARE2YNR019W 1929 nt6.66□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms