Protein–RNA interactions for Protein: P0DN34

Ndufb1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb1P0DN34 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.7□□□□□ -0.38
Ndufb1P0DN34 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndufb1P0DN34 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ndufb1P0DN34 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ndufb1P0DN34 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndufb1P0DN34 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ndufb1P0DN34 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ndufb1P0DN34 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndufb1P0DN34 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndufb1P0DN34 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndufb1P0DN34 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC12.69□□□□□ -0.38
Ndufb1P0DN34 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndufb1P0DN34 Gm38160-201ENSMUST00000193090 2499 ntBASIC12.69□□□□□ -0.38
Ndufb1P0DN34 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndufb1P0DN34 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndufb1P0DN34 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndufb1P0DN34 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ndufb1P0DN34 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndufb1P0DN34 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ndufb1P0DN34 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ndufb1P0DN34 Dapk1-207ENSMUST00000226059 5009 ntBASIC12.68□□□□□ -0.38
Ndufb1P0DN34 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndufb1P0DN34 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ndufb1P0DN34 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ndufb1P0DN34 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC12.67□□□□□ -0.38
Ndufb1P0DN34 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ndufb1P0DN34 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC12.67□□□□□ -0.38
Ndufb1P0DN34 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ndufb1P0DN34 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ndufb1P0DN34 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ndufb1P0DN34 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ndufb1P0DN34 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ndufb1P0DN34 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ndufb1P0DN34 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ndufb1P0DN34 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ndufb1P0DN34 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndufb1P0DN34 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndufb1P0DN34 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndufb1P0DN34 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ndufb1P0DN34 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ndufb1P0DN34 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndufb1P0DN34 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC12.62□□□□□ -0.39
Ndufb1P0DN34 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndufb1P0DN34 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndufb1P0DN34 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ndufb1P0DN34 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndufb1P0DN34 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndufb1P0DN34 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ndufb1P0DN34 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndufb1P0DN34 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndufb1P0DN34 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndufb1P0DN34 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndufb1P0DN34 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ndufb1P0DN34 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndufb1P0DN34 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndufb1P0DN34 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndufb1P0DN34 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndufb1P0DN34 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndufb1P0DN34 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndufb1P0DN34 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndufb1P0DN34 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndufb1P0DN34 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC12.59□□□□□ -0.39
Ndufb1P0DN34 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndufb1P0DN34 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufb1P0DN34 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ndufb1P0DN34 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufb1P0DN34 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufb1P0DN34 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ndufb1P0DN34 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms