Protein–RNA interactions for Protein: Q9CQC5

Cdc42ep3, Cdc42 effector protein 3, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep3Q9CQC5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.89■□□□□ 0.94
Cdc42ep3Q9CQC5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.89■□□□□ 0.94
Cdc42ep3Q9CQC5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdc42ep3Q9CQC5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdc42ep3Q9CQC5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdc42ep3Q9CQC5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.88■□□□□ 0.93
Cdc42ep3Q9CQC5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc42ep3Q9CQC5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.88■□□□□ 0.93
Cdc42ep3Q9CQC5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc42ep3Q9CQC5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cdc42ep3Q9CQC5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdc42ep3Q9CQC5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep3Q9CQC5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep3Q9CQC5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep3Q9CQC5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdc42ep3Q9CQC5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cdc42ep3Q9CQC5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdc42ep3Q9CQC5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cdc42ep3Q9CQC5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdc42ep3Q9CQC5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdc42ep3Q9CQC5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.81■□□□□ 0.92
Cdc42ep3Q9CQC5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdc42ep3Q9CQC5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdc42ep3Q9CQC5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cdc42ep3Q9CQC5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
Cdc42ep3Q9CQC5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdc42ep3Q9CQC5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdc42ep3Q9CQC5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.77■□□□□ 0.92
Cdc42ep3Q9CQC5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.77■□□□□ 0.92
Cdc42ep3Q9CQC5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdc42ep3Q9CQC5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.77■□□□□ 0.91
Cdc42ep3Q9CQC5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdc42ep3Q9CQC5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdc42ep3Q9CQC5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdc42ep3Q9CQC5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdc42ep3Q9CQC5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Gm10232-201ENSMUST00000089221 720 ntBASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Gm13241-201ENSMUST00000094493 780 ntBASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdc42ep3Q9CQC5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdc42ep3Q9CQC5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdc42ep3Q9CQC5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdc42ep3Q9CQC5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdc42ep3Q9CQC5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdc42ep3Q9CQC5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdc42ep3Q9CQC5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdc42ep3Q9CQC5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.7■□□□□ 0.9
Cdc42ep3Q9CQC5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdc42ep3Q9CQC5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Cdc42ep3Q9CQC5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cdc42ep3Q9CQC5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdc42ep3Q9CQC5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.68■□□□□ 0.9
Cdc42ep3Q9CQC5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms