Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC36■■■■□ 3.35
Rpap1Q80TE0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC36■■■■□ 3.35
Rpap1Q80TE0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Rpap1Q80TE0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC36■■■■□ 3.35
Rpap1Q80TE0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC36■■■■□ 3.35
Rpap1Q80TE0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC36■■■■□ 3.35
Rpap1Q80TE0 Gm45102-201ENSMUST00000207427 857 ntBASIC36■■■■□ 3.35
Rpap1Q80TE0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC35.99■■■■□ 3.35
Rpap1Q80TE0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC35.98■■■■□ 3.35
Rpap1Q80TE0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Rpap1Q80TE0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Rpap1Q80TE0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Rpap1Q80TE0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC35.96■■■■□ 3.35
Rpap1Q80TE0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Rpap1Q80TE0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
Rpap1Q80TE0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC35.94■■■■□ 3.34
Rpap1Q80TE0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Rpap1Q80TE0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Rpap1Q80TE0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Rpap1Q80TE0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
Rpap1Q80TE0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Rpap1Q80TE0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC35.91■■■■□ 3.34
Rpap1Q80TE0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Rpap1Q80TE0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
Rpap1Q80TE0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Rpap1Q80TE0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC35.88■■■■□ 3.33
Rpap1Q80TE0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Rpap1Q80TE0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC35.86■■■■□ 3.33
Rpap1Q80TE0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC35.86■■■■□ 3.33
Rpap1Q80TE0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC35.85■■■■□ 3.33
Rpap1Q80TE0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC35.84■■■■□ 3.33
Rpap1Q80TE0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Rpap1Q80TE0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC35.84■■■■□ 3.33
Rpap1Q80TE0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Rpap1Q80TE0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC35.83■■■■□ 3.33
Rpap1Q80TE0 Gm9959-201ENSMUST00000068277 390 ntBASIC35.83■■■■□ 3.33
Rpap1Q80TE0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC35.82■■■■□ 3.33
Rpap1Q80TE0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
Rpap1Q80TE0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Rpap1Q80TE0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Rpap1Q80TE0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC35.81■■■■□ 3.32
Rpap1Q80TE0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC35.8■■■■□ 3.32
Rpap1Q80TE0 AC117769.4-201ENSMUST00000225679 685 ntBASIC35.8■■■■□ 3.32
Rpap1Q80TE0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC35.8■■■■□ 3.32
Rpap1Q80TE0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC35.79■■■■□ 3.32
Rpap1Q80TE0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC35.79■■■■□ 3.32
Rpap1Q80TE0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC35.79■■■■□ 3.32
Rpap1Q80TE0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Rpap1Q80TE0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC35.78■■■■□ 3.32
Rpap1Q80TE0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC35.77■■■■□ 3.32
Rpap1Q80TE0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Rpap1Q80TE0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Rpap1Q80TE0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC35.76■■■■□ 3.31
Rpap1Q80TE0 Gm42501-201ENSMUST00000200220 1026 ntBASIC35.75■■■■□ 3.31
Rpap1Q80TE0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Rpap1Q80TE0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Rpap1Q80TE0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Amer2-203ENSMUST00000225247 2662 ntBASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC35.74■■■■□ 3.31
Rpap1Q80TE0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Rpap1Q80TE0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Rpap1Q80TE0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Rpap1Q80TE0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Rpap1Q80TE0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
Rpap1Q80TE0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC35.71■■■■□ 3.31
Rpap1Q80TE0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC35.71■■■■□ 3.31
Rpap1Q80TE0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Rpap1Q80TE0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC35.7■■■■□ 3.31
Rpap1Q80TE0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Rpap1Q80TE0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Rpap1Q80TE0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC35.69■■■■□ 3.3
Rpap1Q80TE0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC35.69■■■■□ 3.3
Rpap1Q80TE0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Gm18755-201ENSMUST00000218030 1099 ntBASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
Rpap1Q80TE0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Rpap1Q80TE0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Rpap1Q80TE0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC35.67■■■■□ 3.3
Rpap1Q80TE0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
Rpap1Q80TE0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC35.65■■■■□ 3.3
Rpap1Q80TE0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC35.63■■■■□ 3.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms