Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scn10aQ6QIY3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.54■■□□□ 1.84
Scn10aQ6QIY3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Scn10aQ6QIY3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Scn10aQ6QIY3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.52■■□□□ 1.84
Scn10aQ6QIY3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.52■■□□□ 1.84
Scn10aQ6QIY3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Scn10aQ6QIY3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Scn10aQ6QIY3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Scn10aQ6QIY3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.51■■□□□ 1.83
Scn10aQ6QIY3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.51■■□□□ 1.83
Scn10aQ6QIY3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.51■■□□□ 1.83
Scn10aQ6QIY3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Scn10aQ6QIY3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scn10aQ6QIY3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Scn10aQ6QIY3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.5■■□□□ 1.83
Scn10aQ6QIY3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Scn10aQ6QIY3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Scn10aQ6QIY3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Scn10aQ6QIY3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Scn10aQ6QIY3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.49■■□□□ 1.83
Scn10aQ6QIY3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Scn10aQ6QIY3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.48■■□□□ 1.83
Scn10aQ6QIY3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Scn10aQ6QIY3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Scn10aQ6QIY3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Scn10aQ6QIY3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Scn10aQ6QIY3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Scn10aQ6QIY3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scn10aQ6QIY3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Scn10aQ6QIY3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Scn10aQ6QIY3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scn10aQ6QIY3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Scn10aQ6QIY3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Scn10aQ6QIY3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.46■■□□□ 1.83
Scn10aQ6QIY3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Scn10aQ6QIY3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Scn10aQ6QIY3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Scn10aQ6QIY3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC26.45■■□□□ 1.82
Scn10aQ6QIY3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.45■■□□□ 1.82
Scn10aQ6QIY3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.44■■□□□ 1.82
Scn10aQ6QIY3 Gm9959-201ENSMUST00000068277 390 ntBASIC26.44■■□□□ 1.82
Scn10aQ6QIY3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Scn10aQ6QIY3 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.43■■□□□ 1.82
Scn10aQ6QIY3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.43■■□□□ 1.82
Scn10aQ6QIY3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scn10aQ6QIY3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Scn10aQ6QIY3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Scn10aQ6QIY3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.42■■□□□ 1.82
Scn10aQ6QIY3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scn10aQ6QIY3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scn10aQ6QIY3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scn10aQ6QIY3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.41■■□□□ 1.82
Scn10aQ6QIY3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scn10aQ6QIY3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Scn10aQ6QIY3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Scn10aQ6QIY3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Scn10aQ6QIY3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Scn10aQ6QIY3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Scn10aQ6QIY3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scn10aQ6QIY3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Scn10aQ6QIY3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC26.38■■□□□ 1.81
Scn10aQ6QIY3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Scn10aQ6QIY3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Scn10aQ6QIY3 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.37■■□□□ 1.81
Scn10aQ6QIY3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.37■■□□□ 1.81
Scn10aQ6QIY3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Scn10aQ6QIY3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Scn10aQ6QIY3 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.36■■□□□ 1.81
Scn10aQ6QIY3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Scn10aQ6QIY3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.35■■□□□ 1.81
Scn10aQ6QIY3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Scn10aQ6QIY3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Scn10aQ6QIY3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Scn10aQ6QIY3 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.35■■□□□ 1.81
Scn10aQ6QIY3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Scn10aQ6QIY3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.34■■□□□ 1.81
Scn10aQ6QIY3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Scn10aQ6QIY3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Scn10aQ6QIY3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Scn10aQ6QIY3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Scn10aQ6QIY3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Scn10aQ6QIY3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Scn10aQ6QIY3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn10aQ6QIY3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn10aQ6QIY3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Scn10aQ6QIY3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scn10aQ6QIY3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC26.31■■□□□ 1.8
Scn10aQ6QIY3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scn10aQ6QIY3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scn10aQ6QIY3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scn10aQ6QIY3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Scn10aQ6QIY3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scn10aQ6QIY3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Scn10aQ6QIY3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Scn10aQ6QIY3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Scn10aQ6QIY3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 166.9 ms