Protein–RNA interactions for Protein: Q5H8B9

Frem3, FRAS1-related extracellular matrix protein 3, mousemouse

Predictions only

Length 2,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem3Q5H8B9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Frem3Q5H8B9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Frem3Q5H8B9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Frem3Q5H8B9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.3■■□□□ 1.32
Frem3Q5H8B9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Frem3Q5H8B9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Frem3Q5H8B9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Frem3Q5H8B9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Frem3Q5H8B9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.29■■□□□ 1.32
Frem3Q5H8B9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Frem3Q5H8B9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Frem3Q5H8B9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Frem3Q5H8B9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Frem3Q5H8B9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Frem3Q5H8B9 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.27■■□□□ 1.32
Frem3Q5H8B9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Frem3Q5H8B9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Frem3Q5H8B9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.27■■□□□ 1.32
Frem3Q5H8B9 Gm15039-201ENSMUST00000118914 875 ntBASIC23.27■■□□□ 1.32
Frem3Q5H8B9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Frem3Q5H8B9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.27■■□□□ 1.32
Frem3Q5H8B9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Frem3Q5H8B9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Frem3Q5H8B9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Frem3Q5H8B9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Frem3Q5H8B9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Frem3Q5H8B9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.25■■□□□ 1.31
Frem3Q5H8B9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Frem3Q5H8B9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Frem3Q5H8B9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Frem3Q5H8B9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.24■■□□□ 1.31
Frem3Q5H8B9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Frem3Q5H8B9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Frem3Q5H8B9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Frem3Q5H8B9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frem3Q5H8B9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Frem3Q5H8B9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.23■■□□□ 1.31
Frem3Q5H8B9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frem3Q5H8B9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Frem3Q5H8B9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Frem3Q5H8B9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Frem3Q5H8B9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Frem3Q5H8B9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Frem3Q5H8B9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Frem3Q5H8B9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Frem3Q5H8B9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Frem3Q5H8B9 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.21■■□□□ 1.31
Frem3Q5H8B9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Frem3Q5H8B9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Frem3Q5H8B9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Frem3Q5H8B9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frem3Q5H8B9 Gm14117-201ENSMUST00000122417 843 ntBASIC23.19■■□□□ 1.3
Frem3Q5H8B9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frem3Q5H8B9 Gm15820-201ENSMUST00000201566 728 ntBASIC23.19■■□□□ 1.3
Frem3Q5H8B9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frem3Q5H8B9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frem3Q5H8B9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Frem3Q5H8B9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Frem3Q5H8B9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.18■■□□□ 1.3
Frem3Q5H8B9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Frem3Q5H8B9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Frem3Q5H8B9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Frem3Q5H8B9 Rps24-207ENSMUST00000224568 714 ntBASIC23.17■■□□□ 1.3
Frem3Q5H8B9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Frem3Q5H8B9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Frem3Q5H8B9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.17■■□□□ 1.3
Frem3Q5H8B9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.17■■□□□ 1.3
Frem3Q5H8B9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Frem3Q5H8B9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.16■■□□□ 1.3
Frem3Q5H8B9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.16■■□□□ 1.3
Frem3Q5H8B9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Frem3Q5H8B9 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.16■■□□□ 1.3
Frem3Q5H8B9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Frem3Q5H8B9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Frem3Q5H8B9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Frem3Q5H8B9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Frem3Q5H8B9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.14■■□□□ 1.3
Frem3Q5H8B9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Frem3Q5H8B9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Frem3Q5H8B9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Frem3Q5H8B9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Frem3Q5H8B9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Frem3Q5H8B9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Frem3Q5H8B9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Frem3Q5H8B9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Frem3Q5H8B9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Frem3Q5H8B9 Gm45102-201ENSMUST00000207427 857 ntBASIC23.12■■□□□ 1.29
Frem3Q5H8B9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Frem3Q5H8B9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Frem3Q5H8B9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Frem3Q5H8B9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.11■■□□□ 1.29
Frem3Q5H8B9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.11■■□□□ 1.29
Frem3Q5H8B9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Frem3Q5H8B9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Frem3Q5H8B9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.11■■□□□ 1.29
Frem3Q5H8B9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Frem3Q5H8B9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Frem3Q5H8B9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Frem3Q5H8B9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Frem3Q5H8B9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms