Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.47■■□□□ 1.99
Atp6v1aP50516 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Atp6v1aP50516 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Atp6v1aP50516 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.46■■□□□ 1.99
Atp6v1aP50516 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Atp6v1aP50516 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.45■■□□□ 1.98
Atp6v1aP50516 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC27.45■■□□□ 1.98
Atp6v1aP50516 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Atp6v1aP50516 Gm45444-201ENSMUST00000211394 898 ntBASIC27.45■■□□□ 1.98
Atp6v1aP50516 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
Atp6v1aP50516 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Atp6v1aP50516 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC27.44■■□□□ 1.98
Atp6v1aP50516 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Atp6v1aP50516 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Atp6v1aP50516 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Atp6v1aP50516 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
Atp6v1aP50516 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.42■■□□□ 1.98
Atp6v1aP50516 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC27.42■■□□□ 1.98
Atp6v1aP50516 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Atp6v1aP50516 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.41■■□□□ 1.98
Atp6v1aP50516 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Atp6v1aP50516 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Atp6v1aP50516 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC27.39■■□□□ 1.98
Atp6v1aP50516 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Atp6v1aP50516 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Atp6v1aP50516 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Atp6v1aP50516 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Atp6v1aP50516 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.37■■□□□ 1.97
Atp6v1aP50516 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Atp6v1aP50516 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Atp6v1aP50516 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC27.37■■□□□ 1.97
Atp6v1aP50516 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC27.37■■□□□ 1.97
Atp6v1aP50516 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Atp6v1aP50516 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Atp6v1aP50516 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Atp6v1aP50516 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC27.36■■□□□ 1.97
Atp6v1aP50516 Gm45102-201ENSMUST00000207427 857 ntBASIC27.36■■□□□ 1.97
Atp6v1aP50516 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Atp6v1aP50516 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Atp6v1aP50516 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
Atp6v1aP50516 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.35■■□□□ 1.97
Atp6v1aP50516 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Atp6v1aP50516 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Atp6v1aP50516 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Atp6v1aP50516 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Atp6v1aP50516 Gm14117-201ENSMUST00000122417 843 ntBASIC27.34■■□□□ 1.97
Atp6v1aP50516 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Atp6v1aP50516 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Atp6v1aP50516 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Atp6v1aP50516 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Atp6v1aP50516 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Atp6v1aP50516 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Atp6v1aP50516 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Atp6v1aP50516 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Atp6v1aP50516 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC27.32■■□□□ 1.96
Atp6v1aP50516 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC27.32■■□□□ 1.96
Atp6v1aP50516 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Atp6v1aP50516 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Atp6v1aP50516 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Atp6v1aP50516 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Atp6v1aP50516 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Atp6v1aP50516 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
Atp6v1aP50516 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Atp6v1aP50516 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Atp6v1aP50516 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.3■■□□□ 1.96
Atp6v1aP50516 Gm42501-201ENSMUST00000200220 1026 ntBASIC27.29■■□□□ 1.96
Atp6v1aP50516 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Atp6v1aP50516 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Atp6v1aP50516 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Atp6v1aP50516 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Atp6v1aP50516 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC27.28■■□□□ 1.96
Atp6v1aP50516 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC27.27■■□□□ 1.96
Atp6v1aP50516 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Atp6v1aP50516 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Atp6v1aP50516 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Atp6v1aP50516 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Atp6v1aP50516 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Atp6v1aP50516 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Atp6v1aP50516 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Atp6v1aP50516 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Atp6v1aP50516 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Atp6v1aP50516 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Atp6v1aP50516 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Atp6v1aP50516 Gm9959-201ENSMUST00000068277 390 ntBASIC27.24■■□□□ 1.95
Atp6v1aP50516 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Atp6v1aP50516 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Atp6v1aP50516 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Atp6v1aP50516 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp6v1aP50516 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp6v1aP50516 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp6v1aP50516 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp6v1aP50516 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Atp6v1aP50516 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Atp6v1aP50516 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Atp6v1aP50516 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC27.21■■□□□ 1.95
Atp6v1aP50516 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Atp6v1aP50516 Gm18755-201ENSMUST00000218030 1099 ntBASIC27.2■■□□□ 1.94
Atp6v1aP50516 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Atp6v1aP50516 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Atp6v1aP50516 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms