Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 SUF5tG(CCC)O 72 nt5.82□□□□□ -1.48
PGD1P40356 ICS3YJL077C 396 nt5.82□□□□□ -1.48
PGD1P40356 NCA3YJL116C 1014 nt5.82□□□□□ -1.48
PGD1P40356 YKR032WYKR032W 315 nt5.82□□□□□ -1.48
PGD1P40356 CTA1YDR256C 1548 nt5.82□□□□□ -1.48
PGD1P40356 HTS1YPR033C 1641 nt5.81□□□□□ -1.48
PGD1P40356 CSC1YLR241W 2349 nt5.81□□□□□ -1.48
PGD1P40356 YFL013W-AYFL013W-A 804 nt5.81□□□□□ -1.48
PGD1P40356 THI4YGR144W 981 nt5.81□□□□□ -1.48
PGD1P40356 YML6YML025C 861 nt5.81□□□□□ -1.48
PGD1P40356 KEL1YHR158C 3495 nt5.81□□□□□ -1.48
PGD1P40356 PET18YCR020C 648 nt5.8□□□□□ -1.48
PGD1P40356 DUS4YLR405W 1104 nt5.8□□□□□ -1.48
PGD1P40356 VHT1YGR065C 1782 nt5.8□□□□□ -1.48
PGD1P40356 ATG22YCL038C 1587 nt5.8□□□□□ -1.48
PGD1P40356 BRN1YBL097W 2265 nt5.79□□□□□ -1.48
PGD1P40356 PET494YNR045W 1470 nt5.79□□□□□ -1.48
PGD1P40356 OAC1YKL120W 975 nt5.79□□□□□ -1.48
PGD1P40356 RPS6AYPL090C 711 nt5.79□□□□□ -1.48
PGD1P40356 RPS6BYBR181C 711 nt5.79□□□□□ -1.48
PGD1P40356 HXT15YDL245C 1704 nt5.79□□□□□ -1.48
PGD1P40356 HXT16YJR158W 1704 nt5.79□□□□□ -1.48
PGD1P40356 MKK1YOR231W 1527 nt5.79□□□□□ -1.48
PGD1P40356 HXK2YGL253W 1461 nt5.78□□□□□ -1.48
PGD1P40356 HPT1YDR399W 666 nt5.78□□□□□ -1.48
PGD1P40356 YMR206WYMR206W 942 nt5.78□□□□□ -1.48
PGD1P40356 DSC3YOR223W 879 nt5.78□□□□□ -1.48
PGD1P40356 RMD9YGL107C 1941 nt5.78□□□□□ -1.48
PGD1P40356 COX9YDL067C 180 nt5.77□□□□□ -1.49
PGD1P40356 YER156CYER156C 1017 nt5.77□□□□□ -1.49
PGD1P40356 tS(GCU)LtS(GCU)L 80 nt5.77□□□□□ -1.49
PGD1P40356 TOS6YNL300W 309 nt5.77□□□□□ -1.49
PGD1P40356 SPS1YDR523C 1473 nt5.77□□□□□ -1.49
PGD1P40356 CCP1YKR066C 1086 nt5.76□□□□□ -1.49
PGD1P40356 YBL070CYBL070C 321 nt5.76□□□□□ -1.49
PGD1P40356 ATP23YNR020C 813 nt5.76□□□□□ -1.49
PGD1P40356 CBK1YNL161W 2271 nt5.76□□□□□ -1.49
PGD1P40356 YDR415CYDR415C 1125 nt5.75□□□□□ -1.49
PGD1P40356 ATP2YJR121W 1536 nt5.74□□□□□ -1.49
PGD1P40356 ESC8YOL017W 2145 nt5.74□□□□□ -1.49
PGD1P40356 TRS31YDR472W 852 nt5.74□□□□□ -1.49
PGD1P40356 FCY1YPR062W 477 nt5.74□□□□□ -1.49
PGD1P40356 YDR387CYDR387C 1668 nt5.74□□□□□ -1.49
PGD1P40356 MPA43YNL249C 1629 nt5.74□□□□□ -1.49
PGD1P40356 HAS1YMR290C 1518 nt5.74□□□□□ -1.49
PGD1P40356 YML133CYML133C 4125 nt5.73□□□□□ -1.49
PGD1P40356 PSA1YDL055C 1086 nt5.73□□□□□ -1.49
PGD1P40356 PET117YER058W 324 nt5.73□□□□□ -1.49
PGD1P40356 SDH8YBR269C 417 nt5.73□□□□□ -1.49
PGD1P40356 PMT3YOR321W 2262 nt5.73□□□□□ -1.49
PGD1P40356 PXL1YKR090W 2121 nt5.72□□□□□ -1.49
PGD1P40356 YDR514CYDR514C 1452 nt5.72□□□□□ -1.49
PGD1P40356 YPR084WYPR084W 1371 nt5.72□□□□□ -1.49
PGD1P40356 GPI11YDR302W 660 nt5.72□□□□□ -1.49
PGD1P40356 AFG1YEL052W 1530 nt5.72□□□□□ -1.49
PGD1P40356 YJL160CYJL160C 864 nt5.71□□□□□ -1.5
PGD1P40356 RBS1YDL189W 1374 nt5.7□□□□□ -1.5
PGD1P40356 MIP1YOR330C 3765 nt5.7□□□□□ -1.5
PGD1P40356 CCW12YLR110C 402 nt5.7□□□□□ -1.5
PGD1P40356 MOD5YOR274W 1287 nt5.7□□□□□ -1.5
PGD1P40356 Q0010Q0010 387 nt5.7□□□□□ -1.5
PGD1P40356 HIS7YBR248C 1659 nt5.69□□□□□ -1.5
PGD1P40356 ALT2YDR111C 1524 nt5.69□□□□□ -1.5
PGD1P40356 CRP1YHR146W 1398 nt5.69□□□□□ -1.5
PGD1P40356 SKP1YDR328C 585 nt5.69□□□□□ -1.5
PGD1P40356 YNL092WYNL092W 1203 nt5.69□□□□□ -1.5
PGD1P40356 HEM1YDR232W 1647 nt5.68□□□□□ -1.5
PGD1P40356 YPT1YFL038C 621 nt5.68□□□□□ -1.5
PGD1P40356 YJL213WYJL213W 996 nt5.68□□□□□ -1.5
PGD1P40356 RPS28AYOR167C 204 nt5.68□□□□□ -1.5
PGD1P40356 UTR2YEL040W 1404 nt5.67□□□□□ -1.5
PGD1P40356 YCR049CYCR049C 447 nt5.67□□□□□ -1.5
PGD1P40356 YIL168WYIL168W 384 nt5.67□□□□□ -1.5
PGD1P40356 YJL064WYJL064W 396 nt5.67□□□□□ -1.5
PGD1P40356 MTC5YDR128W 3447 nt5.67□□□□□ -1.5
PGD1P40356 YDL177CYDL177C 513 nt5.66□□□□□ -1.5
PGD1P40356 URH1YDR400W 1023 nt5.66□□□□□ -1.5
PGD1P40356 DMC1YER179W 1005 nt5.66□□□□□ -1.5
PGD1P40356 IRC11YOR013W 471 nt5.66□□□□□ -1.5
PGD1P40356 HXT17YNR072W 1695 nt5.66□□□□□ -1.5
PGD1P40356 PYK2YOR347C 1521 nt5.65□□□□□ -1.5
PGD1P40356 STB5YHR178W 2232 nt5.65□□□□□ -1.5
PGD1P40356 UTR5YEL035C 501 nt5.65□□□□□ -1.5
PGD1P40356 BZZ1YHR114W 1902 nt5.65□□□□□ -1.51
PGD1P40356 PAU19YMR325W 375 nt5.64□□□□□ -1.51
PGD1P40356 DPM1YPR183W 804 nt5.64□□□□□ -1.51
PGD1P40356 YBR113WYBR113W 483 nt5.64□□□□□ -1.51
PGD1P40356 MRC1YCL061C 3291 nt5.64□□□□□ -1.51
PGD1P40356 LDB19YOR322C 2457 nt5.64□□□□□ -1.51
PGD1P40356 ICT1YLR099C 1185 nt5.63□□□□□ -1.51
PGD1P40356 PRY3YJL078C 2646 nt5.62□□□□□ -1.51
PGD1P40356 PFK2YMR205C 2880 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)BtG(GCC)B 71 nt5.62□□□□□ -1.51
PGD1P40356 SUF16tG(GCC)C 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)D1tG(GCC)D1 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)D2tG(GCC)D2 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)EtG(GCC)E 71 nt5.62□□□□□ -1.51
PGD1P40356 SUF20tG(GCC)F1 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)F2tG(GCC)F2 71 nt5.62□□□□□ -1.51
PGD1P40356 tG(GCC)G1tG(GCC)G1 71 nt5.62□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 22.5 ms