Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Zc3h13E9Q784 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Zc3h13E9Q784 Nsd1-203ENSMUST00000224156 1149 ntBASIC32.34■■■□□ 2.77
Zc3h13E9Q784 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Zc3h13E9Q784 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC32.32■■■□□ 2.76
Zc3h13E9Q784 Gm4419-202ENSMUST00000226239 1431 ntBASIC32.31■■■□□ 2.76
Zc3h13E9Q784 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
Zc3h13E9Q784 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Zc3h13E9Q784 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Zc3h13E9Q784 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Zc3h13E9Q784 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Zc3h13E9Q784 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Zc3h13E9Q784 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Zc3h13E9Q784 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Zc3h13E9Q784 Gm42501-201ENSMUST00000200220 1026 ntBASIC32.29■■■□□ 2.76
Zc3h13E9Q784 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Zc3h13E9Q784 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Zc3h13E9Q784 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Zc3h13E9Q784 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Zc3h13E9Q784 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.76
Zc3h13E9Q784 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC32.26■■■□□ 2.75
Zc3h13E9Q784 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC32.26■■■□□ 2.75
Zc3h13E9Q784 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Zc3h13E9Q784 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Zc3h13E9Q784 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC32.23■■■□□ 2.75
Zc3h13E9Q784 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
Zc3h13E9Q784 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Zc3h13E9Q784 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Zc3h13E9Q784 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC32.21■■■□□ 2.75
Zc3h13E9Q784 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Zc3h13E9Q784 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
Zc3h13E9Q784 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Zc3h13E9Q784 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC32.21■■■□□ 2.75
Zc3h13E9Q784 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Zc3h13E9Q784 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC32.2■■■□□ 2.75
Zc3h13E9Q784 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Zc3h13E9Q784 Gm18755-201ENSMUST00000218030 1099 ntBASIC32.2■■■□□ 2.74
Zc3h13E9Q784 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Zc3h13E9Q784 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Zc3h13E9Q784 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Zc3h13E9Q784 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC32.18■■■□□ 2.74
Zc3h13E9Q784 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Zc3h13E9Q784 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC32.17■■■□□ 2.74
Zc3h13E9Q784 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Zc3h13E9Q784 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Zc3h13E9Q784 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Zc3h13E9Q784 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Zc3h13E9Q784 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC32.17■■■□□ 2.74
Zc3h13E9Q784 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Zc3h13E9Q784 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Zc3h13E9Q784 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Zc3h13E9Q784 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC32.14■■■□□ 2.74
Zc3h13E9Q784 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Zc3h13E9Q784 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Zc3h13E9Q784 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Zc3h13E9Q784 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC32.13■■■□□ 2.73
Zc3h13E9Q784 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC32.12■■■□□ 2.73
Zc3h13E9Q784 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
Zc3h13E9Q784 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Zc3h13E9Q784 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Zc3h13E9Q784 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Zc3h13E9Q784 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
Zc3h13E9Q784 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC32.08■■■□□ 2.73
Zc3h13E9Q784 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC32.07■■■□□ 2.72
Zc3h13E9Q784 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC32.07■■■□□ 2.72
Zc3h13E9Q784 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
Zc3h13E9Q784 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC32.07■■■□□ 2.72
Zc3h13E9Q784 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Zc3h13E9Q784 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Zc3h13E9Q784 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Zc3h13E9Q784 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Zc3h13E9Q784 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Zc3h13E9Q784 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC32.05■■■□□ 2.72
Zc3h13E9Q784 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Zc3h13E9Q784 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Zc3h13E9Q784 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Zc3h13E9Q784 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Zc3h13E9Q784 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC32.01■■■□□ 2.72
Zc3h13E9Q784 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
Zc3h13E9Q784 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC32.01■■■□□ 2.71
Zc3h13E9Q784 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Zc3h13E9Q784 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Zc3h13E9Q784 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC32■■■□□ 2.71
Zc3h13E9Q784 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Zc3h13E9Q784 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Zc3h13E9Q784 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.99■■■□□ 2.71
Zc3h13E9Q784 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
Zc3h13E9Q784 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Zc3h13E9Q784 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC31.98■■■□□ 2.71
Zc3h13E9Q784 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Zc3h13E9Q784 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Zc3h13E9Q784 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Zc3h13E9Q784 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC31.97■■■□□ 2.71
Zc3h13E9Q784 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC31.94■■■□□ 2.7
Zc3h13E9Q784 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Zc3h13E9Q784 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC31.94■■■□□ 2.7
Zc3h13E9Q784 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Zc3h13E9Q784 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Zc3h13E9Q784 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Zc3h13E9Q784 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms