Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.84■□□□□ 0.13
SFTPBP07988 KRT8P45-201ENST00000414328 1447 ntBASIC15.84■□□□□ 0.13
SFTPBP07988 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.84■□□□□ 0.13
SFTPBP07988 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.84■□□□□ 0.13
SFTPBP07988 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.84■□□□□ 0.13
SFTPBP07988 CYP2D8P-201ENST00000433633 1490 ntBASIC15.84■□□□□ 0.13
SFTPBP07988 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SFTPBP07988 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.83■□□□□ 0.13
SFTPBP07988 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SFTPBP07988 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SFTPBP07988 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SFTPBP07988 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.83■□□□□ 0.12
SFTPBP07988 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.83■□□□□ 0.12
SFTPBP07988 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SFTPBP07988 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
SFTPBP07988 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 AC097488.1-201ENST00000507834 756 ntBASIC15.83■□□□□ 0.12
SFTPBP07988 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 SLC25A1P4-201ENST00000567977 778 ntBASIC15.83■□□□□ 0.12
SFTPBP07988 MYC-208ENST00000641036 567 ntBASIC15.83■□□□□ 0.12
SFTPBP07988 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SFTPBP07988 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.83■□□□□ 0.12
SFTPBP07988 AC112777.1-201ENST00000540175 1423 ntBASIC15.83■□□□□ 0.12
SFTPBP07988 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.83■□□□□ 0.12
SFTPBP07988 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.83■□□□□ 0.12
SFTPBP07988 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SFTPBP07988 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.83■□□□□ 0.12
SFTPBP07988 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.83■□□□□ 0.12
SFTPBP07988 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.82■□□□□ 0.12
SFTPBP07988 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SFTPBP07988 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
SFTPBP07988 AC008556.1-201ENST00000610908 2040 ntBASIC15.82■□□□□ 0.12
SFTPBP07988 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.82■□□□□ 0.12
SFTPBP07988 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.82■□□□□ 0.12
SFTPBP07988 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 CRYGFP-201ENST00000418459 633 ntBASIC15.82■□□□□ 0.12
SFTPBP07988 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.82■□□□□ 0.12
SFTPBP07988 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.82■□□□□ 0.12
SFTPBP07988 KRT18P21-201ENST00000515767 1272 ntBASIC15.82■□□□□ 0.12
SFTPBP07988 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.82■□□□□ 0.12
SFTPBP07988 NAPSB-206ENST00000562112 1266 ntBASIC15.82■□□□□ 0.12
SFTPBP07988 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SFTPBP07988 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.82■□□□□ 0.12
SFTPBP07988 AC012306.2-201ENST00000609350 630 ntBASIC15.82■□□□□ 0.12
SFTPBP07988 DGCR10-201ENST00000609839 495 ntBASIC15.82■□□□□ 0.12
SFTPBP07988 AC008622.2-201ENST00000617006 1229 ntBASIC15.82■□□□□ 0.12
SFTPBP07988 AC097493.4-201ENST00000641197 219 ntBASIC15.82■□□□□ 0.12
SFTPBP07988 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SFTPBP07988 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.82■□□□□ 0.12
SFTPBP07988 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SFTPBP07988 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SFTPBP07988 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SFTPBP07988 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.81■□□□□ 0.12
SFTPBP07988 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.81■□□□□ 0.12
SFTPBP07988 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.81■□□□□ 0.12
SFTPBP07988 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.81■□□□□ 0.12
SFTPBP07988 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.81■□□□□ 0.12
SFTPBP07988 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.81■□□□□ 0.12
SFTPBP07988 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SFTPBP07988 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.81■□□□□ 0.12
SFTPBP07988 AL162741.1-201ENST00000565563 1558 ntBASIC15.81■□□□□ 0.12
SFTPBP07988 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SFTPBP07988 AL109659.2-201ENST00000606809 1674 ntBASIC15.81■□□□□ 0.12
SFTPBP07988 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms