Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5493S4R2D1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gm5493S4R2D1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm5493S4R2D1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gm5493S4R2D1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5493S4R2D1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.22■□□□□ 0.67
Gm5493S4R2D1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5493S4R2D1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5493S4R2D1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm5493S4R2D1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5493S4R2D1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gm5493S4R2D1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5493S4R2D1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5493S4R2D1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5493S4R2D1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gm5493S4R2D1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm5493S4R2D1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5493S4R2D1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5493S4R2D1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm5493S4R2D1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5493S4R2D1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5493S4R2D1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5493S4R2D1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.18■□□□□ 0.66
Gm5493S4R2D1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gm5493S4R2D1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5493S4R2D1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Gm5493S4R2D1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5493S4R2D1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm5493S4R2D1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5493S4R2D1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5493S4R2D1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gm5493S4R2D1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5493S4R2D1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5493S4R2D1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5493S4R2D1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5493S4R2D1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5493S4R2D1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5493S4R2D1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5493S4R2D1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.14■□□□□ 0.65
Gm5493S4R2D1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Gm5493S4R2D1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5493S4R2D1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5493S4R2D1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.13■□□□□ 0.65
Gm5493S4R2D1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5493S4R2D1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5493S4R2D1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5493S4R2D1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Gm5493S4R2D1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5493S4R2D1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5493S4R2D1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5493S4R2D1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5493S4R2D1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5493S4R2D1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5493S4R2D1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm5493S4R2D1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm5493S4R2D1 Gm16148-201ENSMUST00000119653 893 ntBASIC19.1■□□□□ 0.65
Gm5493S4R2D1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Gm5493S4R2D1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Gm5493S4R2D1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm5493S4R2D1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gm5493S4R2D1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5493S4R2D1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5493S4R2D1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5493S4R2D1 Gm8109-201ENSMUST00000194076 746 ntBASIC19.09■□□□□ 0.65
Gm5493S4R2D1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5493S4R2D1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Gm5493S4R2D1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Gm5493S4R2D1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Gm5493S4R2D1 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.08■□□□□ 0.65
Gm5493S4R2D1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Gm5493S4R2D1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Gm5493S4R2D1 Particl-201ENSMUST00000205370 1560 ntBASIC19.08■□□□□ 0.65
Gm5493S4R2D1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm5493S4R2D1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Gm5493S4R2D1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.07■□□□□ 0.64
Gm5493S4R2D1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm5493S4R2D1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.07■□□□□ 0.64
Gm5493S4R2D1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm5493S4R2D1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm5493S4R2D1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gm5493S4R2D1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5493S4R2D1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5493S4R2D1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5493S4R2D1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5493S4R2D1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5493S4R2D1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5493S4R2D1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5493S4R2D1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5493S4R2D1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5493S4R2D1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms