Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SpidrQ8BGX7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
SpidrQ8BGX7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.13■■□□□ 1.93
SpidrQ8BGX7 Gm44428-201ENSMUST00000204474 874 ntBASIC27.13■■□□□ 1.93
SpidrQ8BGX7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SpidrQ8BGX7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SpidrQ8BGX7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SpidrQ8BGX7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SpidrQ8BGX7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SpidrQ8BGX7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.12■■□□□ 1.93
SpidrQ8BGX7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SpidrQ8BGX7 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.11■■□□□ 1.93
SpidrQ8BGX7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.11■■□□□ 1.93
SpidrQ8BGX7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SpidrQ8BGX7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.1■■□□□ 1.93
SpidrQ8BGX7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SpidrQ8BGX7 Gm5812-201ENSMUST00000061073 957 ntBASIC27.1■■□□□ 1.93
SpidrQ8BGX7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.1■■□□□ 1.93
SpidrQ8BGX7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SpidrQ8BGX7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SpidrQ8BGX7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SpidrQ8BGX7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SpidrQ8BGX7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SpidrQ8BGX7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SpidrQ8BGX7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
SpidrQ8BGX7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SpidrQ8BGX7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SpidrQ8BGX7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SpidrQ8BGX7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.06■■□□□ 1.92
SpidrQ8BGX7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.05■■□□□ 1.92
SpidrQ8BGX7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SpidrQ8BGX7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SpidrQ8BGX7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SpidrQ8BGX7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
SpidrQ8BGX7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SpidrQ8BGX7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SpidrQ8BGX7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC27.02■■□□□ 1.92
SpidrQ8BGX7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.02■■□□□ 1.92
SpidrQ8BGX7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.02■■□□□ 1.92
SpidrQ8BGX7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SpidrQ8BGX7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SpidrQ8BGX7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SpidrQ8BGX7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SpidrQ8BGX7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
SpidrQ8BGX7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SpidrQ8BGX7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SpidrQ8BGX7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
SpidrQ8BGX7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.97■■□□□ 1.91
SpidrQ8BGX7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SpidrQ8BGX7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.97■■□□□ 1.91
SpidrQ8BGX7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SpidrQ8BGX7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SpidrQ8BGX7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SpidrQ8BGX7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
SpidrQ8BGX7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
SpidrQ8BGX7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
SpidrQ8BGX7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
SpidrQ8BGX7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.93■■□□□ 1.9
SpidrQ8BGX7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SpidrQ8BGX7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SpidrQ8BGX7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SpidrQ8BGX7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SpidrQ8BGX7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SpidrQ8BGX7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
SpidrQ8BGX7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SpidrQ8BGX7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SpidrQ8BGX7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SpidrQ8BGX7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SpidrQ8BGX7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.89■■□□□ 1.9
SpidrQ8BGX7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.88■■□□□ 1.89
SpidrQ8BGX7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SpidrQ8BGX7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SpidrQ8BGX7 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.87■■□□□ 1.89
SpidrQ8BGX7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
SpidrQ8BGX7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SpidrQ8BGX7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
SpidrQ8BGX7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.86■■□□□ 1.89
SpidrQ8BGX7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SpidrQ8BGX7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SpidrQ8BGX7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SpidrQ8BGX7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SpidrQ8BGX7 Gm15546-201ENSMUST00000122095 826 ntBASIC26.85■■□□□ 1.89
SpidrQ8BGX7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SpidrQ8BGX7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SpidrQ8BGX7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SpidrQ8BGX7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SpidrQ8BGX7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
SpidrQ8BGX7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
SpidrQ8BGX7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SpidrQ8BGX7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
SpidrQ8BGX7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.82■■□□□ 1.88
SpidrQ8BGX7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
SpidrQ8BGX7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SpidrQ8BGX7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SpidrQ8BGX7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
SpidrQ8BGX7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SpidrQ8BGX7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SpidrQ8BGX7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SpidrQ8BGX7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SpidrQ8BGX7 Gm13238-201ENSMUST00000117655 780 ntBASIC26.8■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms