Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk3bQ80YF6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Upk3bQ80YF6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Upk3bQ80YF6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Upk3bQ80YF6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Upk3bQ80YF6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk3bQ80YF6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk3bQ80YF6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Upk3bQ80YF6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk3bQ80YF6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk3bQ80YF6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upk3bQ80YF6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk3bQ80YF6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk3bQ80YF6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk3bQ80YF6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upk3bQ80YF6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Upk3bQ80YF6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Upk3bQ80YF6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk3bQ80YF6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk3bQ80YF6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk3bQ80YF6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upk3bQ80YF6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.11■□□□□ 0.65
Upk3bQ80YF6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Upk3bQ80YF6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Upk3bQ80YF6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Upk3bQ80YF6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk3bQ80YF6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk3bQ80YF6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk3bQ80YF6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Upk3bQ80YF6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Upk3bQ80YF6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Upk3bQ80YF6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Upk3bQ80YF6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Upk3bQ80YF6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Upk3bQ80YF6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Upk3bQ80YF6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Upk3bQ80YF6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Upk3bQ80YF6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Upk3bQ80YF6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Upk3bQ80YF6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upk3bQ80YF6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upk3bQ80YF6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upk3bQ80YF6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upk3bQ80YF6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Upk3bQ80YF6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.07■□□□□ 0.64
Upk3bQ80YF6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk3bQ80YF6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk3bQ80YF6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk3bQ80YF6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upk3bQ80YF6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Upk3bQ80YF6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Upk3bQ80YF6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upk3bQ80YF6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.05■□□□□ 0.64
Upk3bQ80YF6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
Upk3bQ80YF6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Upk3bQ80YF6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk3bQ80YF6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Upk3bQ80YF6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk3bQ80YF6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Upk3bQ80YF6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk3bQ80YF6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
Upk3bQ80YF6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Upk3bQ80YF6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Upk3bQ80YF6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Upk3bQ80YF6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Upk3bQ80YF6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Upk3bQ80YF6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Upk3bQ80YF6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upk3bQ80YF6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upk3bQ80YF6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upk3bQ80YF6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19■□□□□ 0.63
Upk3bQ80YF6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upk3bQ80YF6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upk3bQ80YF6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Upk3bQ80YF6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.99■□□□□ 0.63
Upk3bQ80YF6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Upk3bQ80YF6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.98■□□□□ 0.63
Upk3bQ80YF6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk3bQ80YF6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Upk3bQ80YF6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk3bQ80YF6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk3bQ80YF6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk3bQ80YF6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Upk3bQ80YF6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Upk3bQ80YF6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk3bQ80YF6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Upk3bQ80YF6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms